Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 MIR4518-201ENST00000580665 83 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC060766.2-201ENST00000588235 334 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC079228.1-201ENST00000624774 1049 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 MIR1321-201ENST00000637766 79 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC110769.2-201ENST00000602760 1548 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 OR5P1P-201ENST00000299512 925 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 MIR365B-201ENST00000362317 111 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 OR4K12P-201ENST00000406538 961 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 SNX18P3-201ENST00000424993 835 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL035410.1-201ENST00000427409 427 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC027124.1-201ENST00000440852 466 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC239367.2-201ENST00000447309 705 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 PDSS1P2-201ENST00000449397 678 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC140076.1-201ENST00000449897 361 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC092958.1-202ENST00000485006 424 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL117692.1-201ENST00000494283 713 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 CCDC11P1-201ENST00000503137 1162 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC022447.3-201ENST00000506865 495 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC006070.1-201ENST00000508151 193 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC008868.1-201ENST00000509786 737 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL109628.1-201ENST00000556877 366 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AC008737.2-201ENST00000599446 118 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL139286.1-201ENST00000604465 483 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 AL161729.4-201ENST00000604650 476 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 FKBP1AP4-201ENST00000631775 336 ntBASIC8.85□□□□□ -0.99
LRCH3Q96II8 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
LRCH3Q96II8 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
LRCH3Q96II8 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.84□□□□□ -0.99
LRCH3Q96II8 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
LRCH3Q96II8 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms