Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC096664.1-201ENST00000393996 778 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 OR51A3P-201ENST00000413596 924 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 LYPLA2P3-201ENST00000417429 576 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 FBP2P1-202ENST00000424473 530 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL355149.1-201ENST00000438396 882 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC243962.1-201ENST00000441512 579 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC006463.1-201ENST00000445929 232 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 RPL7L1P11-201ENST00000446092 721 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 LDHAP3-201ENST00000448312 1008 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC105910.1-201ENST00000482585 483 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC108688.1-201ENST00000485817 713 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 Z99943.2-201ENST00000507585 266 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 FABP5P7-201ENST00000524732 405 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ZNF123P-201ENST00000531501 1196 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 FRG2HP-201ENST00000568807 832 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AP001004.1-201ENST00000582468 324 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 SS18L2P2-201ENST00000583960 235 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC112230.1-201ENST00000604342 547 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 RNU4-89P-201ENST00000607443 133 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC002059.1-201ENST00000608014 477 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC025031.3-201ENST00000611566 368 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC104237.3-201ENST00000611809 427 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC005332.6-201ENST00000613178 446 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC012150.2-201ENST00000621300 544 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ALG13-226ENST00000622986 582 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 CASC19-260ENST00000641828 2001 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AC245505.2-201ENST00000553572 3055 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 SALL4P7-201ENST00000555779 3120 ntBASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.67□□□□□ -1.18
DEPDC4Q8N2C3 AL355974.1-201ENST00000618896 1708 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 PRYP4-201ENST00000306589 444 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 Y_RNA.813-201ENST00000364639 102 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 RN7SKP239-201ENST00000364814 295 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 RNU6-532P-201ENST00000384318 107 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 snosnR66.1-201ENST00000391095 99 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 LINC00993-201ENST00000420453 540 ntBASIC7.66□□□□□ -1.18
DEPDC4Q8N2C3 AC009237.2-201ENST00000421358 284 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms