Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 IFIT1P1-201ENST00000400497 1449 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC092865.3-201ENST00000425390 1026 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 KCTD9P1-201ENST00000430462 1167 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 HMGB1P7-201ENST00000450921 612 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 RN7SL165P-201ENST00000477476 291 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AP002453.1-201ENST00000492327 668 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AL133399.1-201ENST00000527476 298 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC005363.1-201ENST00000530779 351 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC005632.2-201ENST00000564271 828 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC025171.4-201ENST00000607250 1047 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 LINC02495-203ENST00000636704 242 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 RPL31P11-201ENST00000426558 1558 ntBASIC6.08□□□□□ -1.44
RAB43Q86YS6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAB43Q86YS6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RAB43Q86YS6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 CASC19-246ENST00000641625 1606 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 OR2M1P-201ENST00000318104 951 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 OR7E156P-201ENST00000400303 464 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 AL139805.1-201ENST00000407837 289 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC069154.1-201ENST00000432914 542 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 RPL5P7-201ENST00000444235 813 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 PPP1R11P1-201ENST00000486095 376 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AL357140.4-201ENST00000636827 412 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 MIR1910-201ENST00000636955 80 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 AP001153.1-201ENST00000641024 338 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RAB43Q86YS6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AC125238.2-201ENST00000430003 1440 ntBASIC6.07□□□□□ -1.44
RAB43Q86YS6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAB43Q86YS6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAB43Q86YS6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms