Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CDC42BPAQ5VT25 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CDC42BPAQ5VT25 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42BPAQ5VT25 LINC02019-201ENST00000608605 2060 ntBASIC9.06□□□□□ -0.96
CDC42BPAQ5VT25 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42BPAQ5VT25 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42BPAQ5VT25 HMGB3P24-201ENST00000433260 622 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 AC108693.1-201ENST00000496068 432 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 MIR193BHG-214ENST00000641765 509 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 AC079776.5-201ENST00000641920 211 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 GABARAPL3-201ENST00000412799 354 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 RPS4XP5-201ENST00000419038 768 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 AC012075.1-201ENST00000436549 580 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 SBDSP1-204ENST00000453858 737 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 RN7SL222P-201ENST00000476452 299 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 DUTP7-201ENST00000507982 486 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 AP006245.2-201ENST00000522004 300 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 MIR4505-201ENST00000582238 73 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 TCL6_3.1-201ENST00000619064 137 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 AL035661.1-201ENST00000620459 1144 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 AL133243.4-201ENST00000623116 3109 ntBASIC9.05□□□□□ -0.96
CDC42BPAQ5VT25 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 PARP4P2-201ENST00000446672 3326 ntBASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 AL022237.1-201ENST00000446663 358 ntBASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 SNORA43.3-201ENST00000517240 103 ntBASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 AC016769.4-201ENST00000616893 535 ntBASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42BPAQ5VT25 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 AC103563.5-201ENST00000455643 364 ntBASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 RPL32P33-201ENST00000487023 394 ntBASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 MIR4700-201ENST00000578311 74 ntBASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 FO393422.1-201ENST00000603908 708 ntBASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 AC024940.4-201ENST00000605507 246 ntBASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 AC105749.1-201ENST00000631338 2008 ntBASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 AC127070.3-201ENST00000503695 3263 ntBASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42BPAQ5VT25 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 MRPL53P1-201ENST00000414323 319 ntBASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 AC015983.1-201ENST00000441577 373 ntBASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 MRPS16P1-201ENST00000523462 412 ntBASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 AL691477.1-201ENST00000624398 162 ntBASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 AC025470.1-201ENST00000510053 2032 ntBASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 AC007842.1-201ENST00000597336 2039 ntBASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
CDC42BPAQ5VT25 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms