Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPSAP40-201ENST00000442343 891 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 AKR1D1P1-201ENST00000457236 936 ntBASIC4.26□□□□□ -1.73
RPL39P62891 ACA64.4-201ENST00000459070 127 ntBASIC4.26□□□□□ -1.73
RPL39P62891 RN7SKP198-201ENST00000459286 306 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AC115223.1-201ENST00000466377 870 ntBASIC4.26□□□□□ -1.73
RPL39P62891 PPP1R11P1-201ENST00000486095 376 ntBASIC4.26□□□□□ -1.73
RPL39P62891 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RPL39P62891 AC018645.1-201ENST00000505003 109 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 AC087360.1-201ENST00000518788 616 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 IGHV4-55-201ENST00000520889 368 ntBASIC4.26□□□□□ -1.73
RPL39P62891 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 RPL3P13-201ENST00000550415 216 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.26□□□□□ -1.73
RPL39P62891 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 AC010287.1-201ENST00000566916 357 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AL137000.1-201ENST00000610528 1244 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AC009283.1-201ENST00000615852 645 ntBASIC4.26□□□□□ -1.73
RPL39P62891 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
RPL39P62891 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RPL39P62891 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RPL39P62891 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RPL39P62891 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 AL355488.2-201ENST00000609909 2850 ntBASIC4.26□□□□□ -1.73
RPL39P62891 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RPL39P62891 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
RPL39P62891 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RPL39P62891 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.26□□□□□ -1.73
RPL39P62891 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPL39P62891 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RPL39P62891 QRSL1P3-201ENST00000552666 1316 ntBASIC4.25□□□□□ -1.73
RPL39P62891 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.25□□□□□ -1.73
RPL39P62891 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
RPL39P62891 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 MIR1231-201ENST00000408101 92 ntBASIC4.25□□□□□ -1.73
RPL39P62891 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 AL589794.1-201ENST00000424971 390 ntBASIC4.25□□□□□ -1.73
RPL39P62891 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.25□□□□□ -1.73
RPL39P62891 RPL23AP60-201ENST00000450011 454 ntBASIC4.25□□□□□ -1.73
RPL39P62891 AC022080.2-201ENST00000452932 533 ntBASIC4.25□□□□□ -1.73
RPL39P62891 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 RPL23AP40-201ENST00000487630 390 ntBASIC4.25□□□□□ -1.73
RPL39P62891 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 CCDC11P1-201ENST00000503137 1162 ntBASIC4.25□□□□□ -1.73
RPL39P62891 AC010409.2-201ENST00000505780 478 ntBASIC4.25□□□□□ -1.73
RPL39P62891 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 Y_RNA.710-201ENST00000516975 110 ntBASIC4.25□□□□□ -1.73
RPL39P62891 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RPL39P62891 AP001858.2-201ENST00000536213 601 ntBASIC4.25□□□□□ -1.73
RPL39P62891 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.25□□□□□ -1.73
RPL39P62891 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RPL39P62891 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.25□□□□□ -1.73
RPL39P62891 AC022106.1-201ENST00000612834 766 ntBASIC4.25□□□□□ -1.73
RPL39P62891 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.25□□□□□ -1.73
RPL39P62891 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 SNX18P12-201ENST00000624821 759 ntBASIC4.25□□□□□ -1.73
RPL39P62891 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 AC079776.5-201ENST00000641920 211 ntBASIC4.25□□□□□ -1.73
RPL39P62891 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RPL39P62891 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RPL39P62891 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RPL39P62891 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPL39P62891 PPBPP2-201ENST00000513150 1362 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms