Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.88□□□□□ -1.31
VCPP55072 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
VCPP55072 RNU1-46P-201ENST00000384425 164 ntBASIC6.88□□□□□ -1.31
VCPP55072 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.88□□□□□ -1.31
VCPP55072 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.88□□□□□ -1.31
VCPP55072 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.88□□□□□ -1.31
VCPP55072 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.88□□□□□ -1.31
VCPP55072 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.88□□□□□ -1.31
VCPP55072 RPS7P12-201ENST00000422385 582 ntBASIC6.88□□□□□ -1.31
VCPP55072 GAPDHP33-201ENST00000443168 1013 ntBASIC6.88□□□□□ -1.31
VCPP55072 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.88□□□□□ -1.31
VCPP55072 OR52I1-201ENST00000450052 1050 ntBASIC6.88□□□□□ -1.31
VCPP55072 HLA-DPA3-207ENST00000454398 229 ntBASIC6.88□□□□□ -1.31
VCPP55072 AC009963.3-201ENST00000458090 486 ntBASIC6.88□□□□□ -1.31
VCPP55072 RN7SL629P-201ENST00000489622 285 ntBASIC6.88□□□□□ -1.31
VCPP55072 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 RBBP4P1-201ENST00000502424 1276 ntBASIC6.88□□□□□ -1.31
VCPP55072 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.88□□□□□ -1.31
VCPP55072 AC008429.4-201ENST00000521201 182 ntBASIC6.88□□□□□ -1.31
VCPP55072 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.88□□□□□ -1.31
VCPP55072 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.88□□□□□ -1.31
VCPP55072 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.88□□□□□ -1.31
VCPP55072 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.88□□□□□ -1.31
VCPP55072 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.88□□□□□ -1.31
VCPP55072 AL157899.1-201ENST00000604110 936 ntBASIC6.88□□□□□ -1.31
VCPP55072 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 AC073488.9-201ENST00000631601 754 ntBASIC6.88□□□□□ -1.31
VCPP55072 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
VCPP55072 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VCPP55072 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.87□□□□□ -1.31
VCPP55072 CR788268.1-201ENST00000603931 1809 ntBASIC6.87□□□□□ -1.31
VCPP55072 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
VCPP55072 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
VCPP55072 CASC19-228ENST00000641414 1684 ntBASIC6.87□□□□□ -1.31
VCPP55072 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.87□□□□□ -1.31
VCPP55072 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.87□□□□□ -1.31
VCPP55072 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.87□□□□□ -1.31
VCPP55072 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 FAM32BP-201ENST00000344033 333 ntBASIC6.87□□□□□ -1.31
VCPP55072 RNU1-84P-201ENST00000365447 164 ntBASIC6.87□□□□□ -1.31
VCPP55072 RN7SKP296-201ENST00000411185 341 ntBASIC6.87□□□□□ -1.31
VCPP55072 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.87□□□□□ -1.31
VCPP55072 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 RPL23AP19-201ENST00000436229 369 ntBASIC6.87□□□□□ -1.31
VCPP55072 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.87□□□□□ -1.31
VCPP55072 FTH1P8-201ENST00000498161 514 ntBASIC6.87□□□□□ -1.31
VCPP55072 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 RN7SKP35-201ENST00000517210 151 ntBASIC6.87□□□□□ -1.31
VCPP55072 AC022826.1-201ENST00000519383 805 ntBASIC6.87□□□□□ -1.31
VCPP55072 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.87□□□□□ -1.31
VCPP55072 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 AC093524.1-201ENST00000564266 1094 ntBASIC6.87□□□□□ -1.31
VCPP55072 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.87□□□□□ -1.31
VCPP55072 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.87□□□□□ -1.31
VCPP55072 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.87□□□□□ -1.31
VCPP55072 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.87□□□□□ -1.31
VCPP55072 AC011497.2-201ENST00000600255 639 ntBASIC6.87□□□□□ -1.31
VCPP55072 AC245052.7-201ENST00000601161 359 ntBASIC6.87□□□□□ -1.31
VCPP55072 AC091193.1-201ENST00000604640 448 ntBASIC6.87□□□□□ -1.31
VCPP55072 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 AC022467.1-201ENST00000614738 749 ntBASIC6.87□□□□□ -1.31
VCPP55072 AC012254.5-201ENST00000623573 478 ntBASIC6.87□□□□□ -1.31
VCPP55072 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.87□□□□□ -1.31
VCPP55072 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 AC062022.1-201ENST00000451026 1684 ntBASIC6.87□□□□□ -1.31
VCPP55072 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VCPP55072 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 AP000547.3-204ENST00000588548 2523 ntBASIC6.86□□□□□ -1.31
VCPP55072 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.86□□□□□ -1.31
VCPP55072 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.86□□□□□ -1.31
VCPP55072 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 AC022613.3-201ENST00000560740 1346 ntBASIC6.86□□□□□ -1.31
VCPP55072 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.86□□□□□ -1.31
VCPP55072 AC023490.2-201ENST00000359859 470 ntBASIC6.86□□□□□ -1.31
VCPP55072 MIR323A-201ENST00000362199 86 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms