Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLCN3P51790 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLCN3P51790 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLCN3P51790 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CLCN3P51790 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.85□□□□□ -1.31
CLCN3P51790 RNA5SP350-201ENST00000363298 111 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 SNORA43.1-201ENST00000364863 140 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 RNA5SP122-201ENST00000384457 108 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 LYPLA1P3-201ENST00000402650 695 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 RNA5SP156-201ENST00000410250 110 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 OR6C71P-201ENST00000432580 913 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 TPTE2P1-204ENST00000435256 593 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 AC016724.1-201ENST00000453215 421 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 HLA-DPA3-207ENST00000454398 229 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 AC026254.2-201ENST00000475295 371 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 AC025458.1-201ENST00000506046 166 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.85□□□□□ -1.31
CLCN3P51790 PRMT5P1-201ENST00000514351 598 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CLCN3P51790 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.85□□□□□ -1.31
CLCN3P51790 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.85□□□□□ -1.31
CLCN3P51790 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.85□□□□□ -1.31
CLCN3P51790 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.85□□□□□ -1.31
CLCN3P51790 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.85□□□□□ -1.31
CLCN3P51790 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.85□□□□□ -1.31
CLCN3P51790 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.85□□□□□ -1.31
CLCN3P51790 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.85□□□□□ -1.31
CLCN3P51790 OR7A1P-202ENST00000641542 1158 ntBASIC6.85□□□□□ -1.31
CLCN3P51790 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLCN3P51790 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CLCN3P51790 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
CLCN3P51790 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CLCN3P51790 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CLCN3P51790 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CLCN3P51790 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 ZNF812P-201ENST00000457674 1694 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.84□□□□□ -1.31
CLCN3P51790 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CLCN3P51790 MTATP6P19-201ENST00000413797 659 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 IPPKP1-201ENST00000422501 768 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.84□□□□□ -1.31
CLCN3P51790 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.84□□□□□ -1.31
CLCN3P51790 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.84□□□□□ -1.31
CLCN3P51790 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 AC016908.1-201ENST00000442571 1219 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 GAPDHP23-201ENST00000444823 993 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.84□□□□□ -1.31
CLCN3P51790 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.84□□□□□ -1.31
CLCN3P51790 CST12P-201ENST00000457644 362 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.84□□□□□ -1.31
CLCN3P51790 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.84□□□□□ -1.31
CLCN3P51790 RNA5SP434-201ENST00000516647 121 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 NANOGNBP2-201ENST00000544753 553 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.84□□□□□ -1.31
CLCN3P51790 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.84□□□□□ -1.31
CLCN3P51790 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.84□□□□□ -1.31
CLCN3P51790 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.84□□□□□ -1.31
CLCN3P51790 AL096712.1-201ENST00000614561 159 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
CLCN3P51790 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 PSG10P-201ENST00000501199 1500 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 AC024651.2-201ENST00000562480 2098 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CLCN3P51790 AC005618.1-201ENST00000606901 3148 ntBASIC6.84□□□□□ -1.31
CLCN3P51790 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLCN3P51790 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.84□□□□□ -1.31
CLCN3P51790 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CLCN3P51790 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CLCN3P51790 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.84□□□□□ -1.32
CLCN3P51790 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CLCN3P51790 AC022325.1-201ENST00000502748 2199 ntBASIC6.84□□□□□ -1.32
CLCN3P51790 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.83□□□□□ -1.32
CLCN3P51790 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLCN3P51790 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLCN3P51790 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLCN3P51790 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms