Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CASP4P49662 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.72□□□□□ -1.33
CASP4P49662 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.72□□□□□ -1.33
CASP4P49662 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
CASP4P49662 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CASP4P49662 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CASP4P49662 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CASP4P49662 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CASP4P49662 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.72□□□□□ -1.33
CASP4P49662 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.72□□□□□ -1.33
CASP4P49662 AL139805.1-201ENST00000407837 289 ntBASIC6.72□□□□□ -1.33
CASP4P49662 RNA5SP251-201ENST00000410614 137 ntBASIC6.72□□□□□ -1.33
CASP4P49662 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.72□□□□□ -1.33
CASP4P49662 HSPE1P27-201ENST00000430808 296 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC108479.1-201ENST00000431142 427 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC104339.1-201ENST00000465478 348 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC005165.2-201ENST00000466070 380 ntBASIC6.72□□□□□ -1.33
CASP4P49662 EIF4E2P2-201ENST00000492033 736 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC113367.2-201ENST00000505749 160 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.72□□□□□ -1.33
CASP4P49662 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.72□□□□□ -1.33
CASP4P49662 RNA5SP434-201ENST00000516647 121 ntBASIC6.72□□□□□ -1.33
CASP4P49662 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CASP4P49662 NPIPB14P-203ENST00000532298 987 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.72□□□□□ -1.33
CASP4P49662 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.72□□□□□ -1.33
CASP4P49662 AC090651.1-201ENST00000567865 634 ntBASIC6.72□□□□□ -1.33
CASP4P49662 MIR6780B-201ENST00000610307 79 ntBASIC6.72□□□□□ -1.33
CASP4P49662 uc_338.31-201ENST00000615595 186 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC073488.6-201ENST00000632293 754 ntBASIC6.72□□□□□ -1.33
CASP4P49662 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 AC119674.1-202ENST00000641333 1860 ntBASIC6.72□□□□□ -1.33
CASP4P49662 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CASP4P49662 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 AL117378.2-201ENST00000622916 1337 ntBASIC6.72□□□□□ -1.33
CASP4P49662 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.72□□□□□ -1.33
CASP4P49662 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CASP4P49662 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CASP4P49662 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CASP4P49662 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CASP4P49662 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CASP4P49662 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.71□□□□□ -1.34
CASP4P49662 AC034229.2-201ENST00000566945 2508 ntBASIC6.71□□□□□ -1.34
CASP4P49662 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 RNA5SP375-201ENST00000362975 119 ntBASIC6.71□□□□□ -1.34
CASP4P49662 RNA5SP232-201ENST00000364144 119 ntBASIC6.71□□□□□ -1.34
CASP4P49662 AL451046.1-201ENST00000406097 534 ntBASIC6.71□□□□□ -1.34
CASP4P49662 RN7SKP151-201ENST00000410230 316 ntBASIC6.71□□□□□ -1.34
CASP4P49662 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 AC092865.3-201ENST00000425390 1026 ntBASIC6.71□□□□□ -1.34
CASP4P49662 AC099782.1-201ENST00000425889 474 ntBASIC6.71□□□□□ -1.34
CASP4P49662 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 PSMD10P2-201ENST00000432890 672 ntBASIC6.71□□□□□ -1.34
CASP4P49662 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.71□□□□□ -1.34
CASP4P49662 AC115223.1-201ENST00000466377 870 ntBASIC6.71□□□□□ -1.34
CASP4P49662 SLC25A51P1-201ENST00000468432 871 ntBASIC6.71□□□□□ -1.34
CASP4P49662 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.71□□□□□ -1.34
CASP4P49662 RN7SKP183-201ENST00000517169 324 ntBASIC6.71□□□□□ -1.34
CASP4P49662 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.71□□□□□ -1.34
CASP4P49662 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.71□□□□□ -1.34
CASP4P49662 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.71□□□□□ -1.34
CASP4P49662 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.71□□□□□ -1.34
CASP4P49662 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.71□□□□□ -1.34
CASP4P49662 SMIM12P1-201ENST00000603004 274 ntBASIC6.71□□□□□ -1.34
CASP4P49662 AC141002.1-201ENST00000607025 279 ntBASIC6.71□□□□□ -1.34
CASP4P49662 RN7SL261P-201ENST00000613441 282 ntBASIC6.71□□□□□ -1.34
CASP4P49662 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.71□□□□□ -1.34
CASP4P49662 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.71□□□□□ -1.34
CASP4P49662 AC024651.2-201ENST00000562480 2098 ntBASIC6.71□□□□□ -1.34
CASP4P49662 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.71□□□□□ -1.34
CASP4P49662 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.71□□□□□ -1.34
CASP4P49662 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CASP4P49662 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CASP4P49662 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 AL359091.1-201ENST00000449048 1734 ntBASIC6.7□□□□□ -1.34
CASP4P49662 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CASP4P49662 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CASP4P49662 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.7□□□□□ -1.34
CASP4P49662 AC004014.2-201ENST00000623718 5122 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms