Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 DLEU2L-201ENST00000371086 3555 ntBASIC5.35□□□□□ -1.55
CDX1P47902 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.35□□□□□ -1.55
CDX1P47902 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 DDX43P1-201ENST00000510713 1763 ntBASIC5.34□□□□□ -1.55
CDX1P47902 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDX1P47902 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 AC092701.1-201ENST00000623627 1551 ntBASIC5.34□□□□□ -1.55
CDX1P47902 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDX1P47902 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 AC093278.2-201ENST00000564956 2485 ntBASIC5.34□□□□□ -1.55
CDX1P47902 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 AP002800.1-201ENST00000624982 2225 ntBASIC5.34□□□□□ -1.55
CDX1P47902 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 RNA5SP382-201ENST00000363355 112 ntBASIC5.34□□□□□ -1.55
CDX1P47902 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDX1P47902 AL034417.1-201ENST00000399343 800 ntBASIC5.34□□□□□ -1.55
CDX1P47902 SEPT7P8-201ENST00000413308 775 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.34□□□□□ -1.55
CDX1P47902 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 ETF1P1-206ENST00000427296 984 ntBASIC5.34□□□□□ -1.55
CDX1P47902 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.34□□□□□ -1.55
CDX1P47902 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.34□□□□□ -1.55
CDX1P47902 SNRPFP2-201ENST00000440710 251 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AC234771.4-201ENST00000441416 730 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AL356121.1-201ENST00000442911 156 ntBASIC5.34□□□□□ -1.55
CDX1P47902 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 PPIAP32-201ENST00000449940 472 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 RN7SKP198-201ENST00000459286 306 ntBASIC5.34□□□□□ -1.55
CDX1P47902 RN7SL552P-201ENST00000462094 276 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AC063955.1-201ENST00000462872 685 ntBASIC5.34□□□□□ -1.55
CDX1P47902 UOX-201ENST00000471089 899 ntBASIC5.34□□□□□ -1.55
CDX1P47902 RN7SL654P-201ENST00000479178 292 ntBASIC5.34□□□□□ -1.55
CDX1P47902 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.34□□□□□ -1.55
CDX1P47902 AC098799.1-201ENST00000504752 800 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.34□□□□□ -1.55
CDX1P47902 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.34□□□□□ -1.55
CDX1P47902 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 AC097486.1-201ENST00000515331 210 ntBASIC5.34□□□□□ -1.55
CDX1P47902 MRPS5P3-201ENST00000515577 166 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.34□□□□□ -1.55
CDX1P47902 PPIAP6-201ENST00000557078 499 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 RPL7AP69-201ENST00000595306 806 ntBASIC5.34□□□□□ -1.55
CDX1P47902 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 RPS4XP21-201ENST00000603814 750 ntBASIC5.34□□□□□ -1.55
CDX1P47902 AC004908.1-201ENST00000606572 541 ntBASIC5.34□□□□□ -1.55
CDX1P47902 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 AC244100.4-201ENST00000617747 388 ntBASIC5.34□□□□□ -1.55
CDX1P47902 OR1N1-202ENST00000619659 939 ntBASIC5.34□□□□□ -1.55
CDX1P47902 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 CASC19-260ENST00000641828 2001 ntBASIC5.34□□□□□ -1.55
CDX1P47902 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.34□□□□□ -1.55
CDX1P47902 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.34□□□□□ -1.55
CDX1P47902 AC119674.1-202ENST00000641333 1860 ntBASIC5.34□□□□□ -1.55
CDX1P47902 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDX1P47902 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDX1P47902 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CDX1P47902 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CDX1P47902 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CDX1P47902 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CDX1P47902 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CDX1P47902 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CDX1P47902 MTND5P23-201ENST00000430812 1655 ntBASIC5.34□□□□□ -1.56
CDX1P47902 AC087565.3-202ENST00000642085 1603 ntBASIC5.34□□□□□ -1.56
CDX1P47902 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 SAMM50P1-201ENST00000455403 1399 ntBASIC5.33□□□□□ -1.56
CDX1P47902 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDX1P47902 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms