Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.09□□□□□ -1.27
CTSKP43235 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC7.09□□□□□ -1.27
CTSKP43235 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.09□□□□□ -1.27
CTSKP43235 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.09□□□□□ -1.27
CTSKP43235 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.09□□□□□ -1.27
CTSKP43235 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.09□□□□□ -1.27
CTSKP43235 MIR4428-201ENST00000584884 73 ntBASIC7.09□□□□□ -1.27
CTSKP43235 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.09□□□□□ -1.27
CTSKP43235 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.09□□□□□ -1.27
CTSKP43235 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.09□□□□□ -1.27
CTSKP43235 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.09□□□□□ -1.27
CTSKP43235 AC245100.7-201ENST00000609678 442 ntBASIC7.09□□□□□ -1.27
CTSKP43235 AC092106.3-201ENST00000611308 722 ntBASIC7.09□□□□□ -1.27
CTSKP43235 AL121809.2-201ENST00000613169 341 ntBASIC7.09□□□□□ -1.27
CTSKP43235 AC015819.1-201ENST00000613588 663 ntBASIC7.09□□□□□ -1.27
CTSKP43235 AL161420.1-201ENST00000619393 264 ntBASIC7.09□□□□□ -1.27
CTSKP43235 AL603755.1-201ENST00000619504 163 ntBASIC7.09□□□□□ -1.27
CTSKP43235 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CTSKP43235 AC010480.1-201ENST00000624823 684 ntBASIC7.09□□□□□ -1.27
CTSKP43235 TSHZ2-205ENST00000626626 670 ntBASIC7.09□□□□□ -1.27
CTSKP43235 AC140479.4-205ENST00000636339 820 ntBASIC7.09□□□□□ -1.27
CTSKP43235 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.09□□□□□ -1.27
CTSKP43235 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTSKP43235 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.09□□□□□ -1.27
CTSKP43235 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CTSKP43235 AL391262.1-201ENST00000556558 1992 ntBASIC7.09□□□□□ -1.27
CTSKP43235 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTSKP43235 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CTSKP43235 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.28
CTSKP43235 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.09□□□□□ -1.28
CTSKP43235 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.28
CTSKP43235 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.09□□□□□ -1.28
CTSKP43235 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.09□□□□□ -1.28
CTSKP43235 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
CTSKP43235 AC138915.4-201ENST00000565549 4147 ntBASIC7.08□□□□□ -1.28
CTSKP43235 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 MTND5P11-201ENST00000511037 1812 ntBASIC7.08□□□□□ -1.28
CTSKP43235 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.08□□□□□ -1.28
CTSKP43235 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.08□□□□□ -1.28
CTSKP43235 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 AC053481.2-202ENST00000582394 1500 ntBASIC7.08□□□□□ -1.28
CTSKP43235 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CTSKP43235 RNFT1P3-201ENST00000340898 1052 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AC092634.1-201ENST00000366505 199 ntBASIC7.08□□□□□ -1.28
CTSKP43235 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CTSKP43235 RNU5A-2P-201ENST00000384337 116 ntBASIC7.08□□□□□ -1.28
CTSKP43235 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.08□□□□□ -1.28
CTSKP43235 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.08□□□□□ -1.28
CTSKP43235 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.08□□□□□ -1.28
CTSKP43235 RAC1P4-201ENST00000419413 579 ntBASIC7.08□□□□□ -1.28
CTSKP43235 USP9YP26-201ENST00000421008 661 ntBASIC7.08□□□□□ -1.28
CTSKP43235 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.08□□□□□ -1.28
CTSKP43235 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC7.08□□□□□ -1.28
CTSKP43235 AC096632.2-201ENST00000438139 1239 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AC009518.3-201ENST00000438972 253 ntBASIC7.08□□□□□ -1.28
CTSKP43235 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.08□□□□□ -1.28
CTSKP43235 AC008280.2-201ENST00000455473 307 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AC040975.1-201ENST00000472104 316 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.08□□□□□ -1.28
CTSKP43235 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.08□□□□□ -1.28
CTSKP43235 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.08□□□□□ -1.28
CTSKP43235 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.08□□□□□ -1.28
CTSKP43235 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.08□□□□□ -1.28
CTSKP43235 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC7.08□□□□□ -1.28
CTSKP43235 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC7.08□□□□□ -1.28
CTSKP43235 RN7SL178P-201ENST00000582930 304 ntBASIC7.08□□□□□ -1.28
CTSKP43235 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.08□□□□□ -1.28
CTSKP43235 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 PRR13P5-201ENST00000596581 442 ntBASIC7.08□□□□□ -1.28
CTSKP43235 MRPS35P3-201ENST00000603189 709 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AL035411.2-201ENST00000604022 421 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AL583856.2-201ENST00000606298 543 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AC009779.8-202ENST00000607990 932 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AC007349.4-201ENST00000608114 532 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 MIR6780B-201ENST00000610307 79 ntBASIC7.08□□□□□ -1.28
CTSKP43235 AC211486.4-201ENST00000621495 113 ntBASIC7.08□□□□□ -1.28
CTSKP43235 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.08□□□□□ -1.28
CTSKP43235 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.08□□□□□ -1.28
CTSKP43235 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTSKP43235 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.08□□□□□ -1.28
CTSKP43235 FO082842.1-201ENST00000423552 1370 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms