Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 BX679664.2-201ENST00000439282 283 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 COX4I1P2-201ENST00000447446 547 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC1A1P43005 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC1A1P43005 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC1A1P43005 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC1A1P43005 TDGP1-201ENST00000543961 1229 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 AC092865.1-201ENST00000544395 1023 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 AL049779.3-201ENST00000557141 606 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC1A1P43005 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.47□□□□□ -1.37
SLC1A1P43005 AL591167.1-201ENST00000607321 456 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.47□□□□□ -1.37
SLC1A1P43005 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SLC1A1P43005 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SLC1A1P43005 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
SLC1A1P43005 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
SLC1A1P43005 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SLC1A1P43005 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SLC1A1P43005 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.37
SLC1A1P43005 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SLC1A1P43005 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC003045.1-201ENST00000398779 713 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 IGLV3-4-201ENST00000432300 244 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC1A1P43005 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC015524.1-201ENST00000491585 472 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 AC093325.1-201ENST00000508378 326 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 AC139713.1-202ENST00000512366 460 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 TPM3P3-201ENST00000521343 354 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC1A1P43005 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.46□□□□□ -1.38
SLC1A1P43005 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC1A1P43005 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 MIR132-201ENST00000591554 101 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 AL138960.1-201ENST00000613838 513 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 AC007204.1-201ENST00000621794 555 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 AC009120.7-201ENST00000623452 780 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SLC1A1P43005 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.46□□□□□ -1.38
SLC1A1P43005 CASC19-246ENST00000641625 1606 ntBASIC6.46□□□□□ -1.38
SLC1A1P43005 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.46□□□□□ -1.38
SLC1A1P43005 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.45□□□□□ -1.38
SLC1A1P43005 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 Z95114.1-201ENST00000624264 14574 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.45□□□□□ -1.38
SLC1A1P43005 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SLC1A1P43005 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.45□□□□□ -1.38
SLC1A1P43005 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 RNA5SP346-201ENST00000363541 121 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 AL121977.1-201ENST00000401636 979 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 PTCD2P2-201ENST00000415579 1095 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.45□□□□□ -1.38
SLC1A1P43005 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.45□□□□□ -1.38
SLC1A1P43005 AL031681.1-201ENST00000443304 400 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 RN7SL39P-201ENST00000462264 297 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 RN7SL393P-201ENST00000463588 296 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 RPS4XP17-201ENST00000479057 754 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 RN7SL104P-201ENST00000498686 293 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.45□□□□□ -1.38
SLC1A1P43005 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.45□□□□□ -1.38
SLC1A1P43005 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.45□□□□□ -1.38
SLC1A1P43005 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms