Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC138207.8-204ENST00000579588 527 ntBASIC6.82□□□□□ -1.32
HOXD13P35453 SNORA35B-201ENST00000607417 129 ntBASIC6.82□□□□□ -1.32
HOXD13P35453 SNORA74.4-201ENST00000607595 199 ntBASIC6.82□□□□□ -1.32
HOXD13P35453 AL135999.3-201ENST00000610501 812 ntBASIC6.82□□□□□ -1.32
HOXD13P35453 AL137067.2-201ENST00000621202 131 ntBASIC6.82□□□□□ -1.32
HOXD13P35453 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXD13P35453 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXD13P35453 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXD13P35453 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXD13P35453 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXD13P35453 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXD13P35453 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXD13P35453 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXD13P35453 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXD13P35453 AC011416.1-201ENST00000514947 1732 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD13P35453 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD13P35453 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD13P35453 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD13P35453 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD13P35453 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXD13P35453 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXD13P35453 RN7SKP171-201ENST00000364417 303 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 LCN1P2-201ENST00000372030 223 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD13P35453 NPM1P38-201ENST00000403835 865 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 AL139805.1-201ENST00000407837 289 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 MTND4LP21-201ENST00000415303 295 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD13P35453 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD13P35453 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD13P35453 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD13P35453 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD13P35453 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD13P35453 AC008945.1-201ENST00000505144 499 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXD13P35453 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 SMIM12P1-201ENST00000603004 274 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD13P35453 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 AC111152.1-202ENST00000635848 339 ntBASIC6.81□□□□□ -1.32
HOXD13P35453 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXD13P35453 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXD13P35453 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HOXD13P35453 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
HOXD13P35453 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXD13P35453 AL121768.1-201ENST00000613917 2544 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
HOXD13P35453 RN7SKP184-201ENST00000362348 333 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 MIR188-201ENST00000385034 86 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 CASKP1-201ENST00000412870 582 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD13P35453 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXD13P35453 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC013403.1-201ENST00000436954 263 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXD13P35453 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD13P35453 AC044810.1-201ENST00000480271 711 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 AC024587.1-201ENST00000505925 2157 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC113398.2-201ENST00000507630 558 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD13P35453 AC008676.3-201ENST00000521237 435 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 OR5D2P-201ENST00000524390 911 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC025857.1-201ENST00000525252 377 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AP003033.2-201ENST00000528901 805 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC025423.2-201ENST00000537570 439 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXD13P35453 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXD13P35453 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 AP005136.2-201ENST00000583253 1049 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC020916.2-201ENST00000591242 360 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC027334.1-201ENST00000603257 310 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC008555.7-201ENST00000605008 583 ntBASIC6.8□□□□□ -1.32
HOXD13P35453 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.8□□□□□ -1.32
HOXD13P35453 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXD13P35453 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
HOXD13P35453 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms