Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 MIR1286-201ENST00000408112 78 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A5P29400 NME1P1-201ENST00000420914 382 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 TNPO1P1-201ENST00000423641 1138 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AL139148.1-201ENST00000427122 680 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 MGAT2P1-201ENST00000449718 797 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 HIGD1AP14-201ENST00000507617 282 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
COL4A5P29400 HMGB1P42-201ENST00000532126 553 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.19□□□□□ -1.26
COL4A5P29400 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.19□□□□□ -1.26
COL4A5P29400 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 TXNP4-201ENST00000575018 310 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AC119403.2-201ENST00000590960 598 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 AC136428.4-201ENST00000634254 1155 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
COL4A5P29400 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.19□□□□□ -1.26
COL4A5P29400 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
COL4A5P29400 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 YES1P1-201ENST00000418510 1628 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
COL4A5P29400 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 AL645927.1-201ENST00000396783 406 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A5P29400 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A5P29400 EEF1B2P5-201ENST00000444820 548 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A5P29400 OR13C1P-201ENST00000457612 963 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.19□□□□□ -1.26
COL4A5P29400 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.19□□□□□ -1.26
COL4A5P29400 RNA5SP400-201ENST00000517155 111 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 OR7E158P-201ENST00000524483 910 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.19□□□□□ -1.26
COL4A5P29400 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
COL4A5P29400 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.19□□□□□ -1.26
COL4A5P29400 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.19□□□□□ -1.26
COL4A5P29400 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
COL4A5P29400 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.19□□□□□ -1.26
COL4A5P29400 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 AC097467.4-201ENST00000605504 141 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 Mico1.1-201ENST00000611698 204 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 AC037198.3-201ENST00000616754 526 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.19□□□□□ -1.26
COL4A5P29400 AC022726.2-201ENST00000634673 547 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL4A5P29400 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.19□□□□□ -1.26
COL4A5P29400 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL4A5P29400 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A5P29400 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL4A5P29400 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL4A5P29400 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL4A5P29400 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL4A5P29400 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A5P29400 AL161756.3-201ENST00000641216 2071 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 AC025809.2-201ENST00000625085 1802 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 AC092725.2-201ENST00000567658 1389 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A5P29400 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.18□□□□□ -1.26
COL4A5P29400 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.18□□□□□ -1.26
COL4A5P29400 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.18□□□□□ -1.26
COL4A5P29400 SDC4P-201ENST00000453285 601 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.18□□□□□ -1.26
COL4A5P29400 AC115223.1-201ENST00000466377 870 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 AC105420.1-201ENST00000504389 582 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 OR56A7P-201ENST00000524865 941 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.18□□□□□ -1.26
COL4A5P29400 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.18□□□□□ -1.26
COL4A5P29400 SETP3-201ENST00000581726 813 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A5P29400 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A5P29400 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 AC005840.5-201ENST00000619166 599 ntBASIC7.18□□□□□ -1.26
COL4A5P29400 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A5P29400 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms