Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 HMGB3P18-201ENST00000406327 590 ntBASIC8.29□□□□□ -1.08
RFX1P22670 RN7SKP30-201ENST00000411373 334 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AL590806.1-201ENST00000415818 853 ntBASIC8.29□□□□□ -1.08
RFX1P22670 MEAF6P1-201ENST00000416092 327 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC066692.1-201ENST00000421721 457 ntBASIC8.29□□□□□ -1.08
RFX1P22670 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 FDPSP6-201ENST00000425091 512 ntBASIC8.29□□□□□ -1.08
RFX1P22670 RPL5P6-201ENST00000425640 886 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AKR1B10P1-201ENST00000425765 942 ntBASIC8.29□□□□□ -1.08
RFX1P22670 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.29□□□□□ -1.08
RFX1P22670 YWHAEP5-201ENST00000431545 765 ntBASIC8.29□□□□□ -1.08
RFX1P22670 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 AC099344.1-201ENST00000433548 492 ntBASIC8.29□□□□□ -1.08
RFX1P22670 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 GTF2IP7-202ENST00000436677 309 ntBASIC8.29□□□□□ -1.08
RFX1P22670 SALL1P1-201ENST00000438101 3837 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 RPL12P40-201ENST00000467028 488 ntBASIC8.29□□□□□ -1.08
RFX1P22670 RN7SL145P-201ENST00000469955 296 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC087385.2-201ENST00000477729 498 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC069304.1-201ENST00000491593 704 ntBASIC8.29□□□□□ -1.08
RFX1P22670 RN7SL182P-201ENST00000496499 300 ntBASIC8.29□□□□□ -1.08
RFX1P22670 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 RNU6-1004P-201ENST00000516584 111 ntBASIC8.29□□□□□ -1.08
RFX1P22670 IGKV1D-32-201ENST00000517449 318 ntBASIC8.29□□□□□ -1.08
RFX1P22670 IGHV3-63-201ENST00000518422 341 ntBASIC8.29□□□□□ -1.08
RFX1P22670 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.29□□□□□ -1.08
RFX1P22670 AC124293.1-201ENST00000530034 493 ntBASIC8.29□□□□□ -1.08
RFX1P22670 YWHABP2-201ENST00000540201 713 ntBASIC8.29□□□□□ -1.08
RFX1P22670 UBE2NP1-201ENST00000545592 458 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.29□□□□□ -1.08
RFX1P22670 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 AGGF1P4-201ENST00000568249 801 ntBASIC8.29□□□□□ -1.08
RFX1P22670 MTATP6P3-201ENST00000581686 676 ntBASIC8.29□□□□□ -1.08
RFX1P22670 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 BNIP3P26-201ENST00000600827 554 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AP003465.2-201ENST00000602571 373 ntBASIC8.29□□□□□ -1.08
RFX1P22670 CLPTM1LP1-201ENST00000604519 484 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 STMN1P1-201ENST00000617809 440 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AL121985.3-201ENST00000620690 523 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC027506.1-201ENST00000621395 198 ntBASIC8.29□□□□□ -1.08
RFX1P22670 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 PDCD6IPP1-202ENST00000622242 1064 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC099667.1-201ENST00000624222 469 ntBASIC8.29□□□□□ -1.08
RFX1P22670 AC110769.3-201ENST00000624567 1173 ntBASIC8.29□□□□□ -1.08
RFX1P22670 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.29□□□□□ -1.08
RFX1P22670 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 AC025263.3-201ENST00000622965 1396 ntBASIC8.29□□□□□ -1.08
RFX1P22670 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
RFX1P22670 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RFX1P22670 CR381670.1-201ENST00000624291 1693 ntBASIC8.29□□□□□ -1.08
RFX1P22670 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RFX1P22670 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 MAPK10-377ENST00000642006 2752 ntBASIC8.29□□□□□ -1.08
RFX1P22670 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RFX1P22670 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms