Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.4□□□□□ -1.22
COL1A1P02452 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.4□□□□□ -1.22
COL1A1P02452 SDHDP6-201ENST00000414693 480 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 AL445466.1-201ENST00000448432 357 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 RPSAP39-201ENST00000467439 883 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 SETP21-201ENST00000514799 892 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 TMEM97P2-201ENST00000517841 403 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 AP005639.1-201ENST00000526939 192 ntBASIC7.4□□□□□ -1.22
COL1A1P02452 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL1A1P02452 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.4□□□□□ -1.22
COL1A1P02452 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
COL1A1P02452 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.4□□□□□ -1.22
COL1A1P02452 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL1A1P02452 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.4□□□□□ -1.22
COL1A1P02452 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL1A1P02452 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL1A1P02452 AC092692.1-201ENST00000623625 2595 ntBASIC7.4□□□□□ -1.23
COL1A1P02452 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
COL1A1P02452 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.4□□□□□ -1.23
COL1A1P02452 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL1A1P02452 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL1A1P02452 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
COL1A1P02452 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL1A1P02452 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.39□□□□□ -1.23
COL1A1P02452 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.39□□□□□ -1.23
COL1A1P02452 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.39□□□□□ -1.23
COL1A1P02452 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 RPS3AP2-201ENST00000407190 754 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AL096829.1-201ENST00000413677 457 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AL035660.1-201ENST00000422041 222 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL1A1P02452 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 AP000281.1-201ENST00000444036 316 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 RPS27AP2-201ENST00000457576 465 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AC008945.1-201ENST00000505144 499 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AC008638.1-201ENST00000506035 866 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 AC096754.1-201ENST00000508904 818 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 RNA5SP362-201ENST00000516048 118 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 RNA5SP400-201ENST00000517155 111 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.39□□□□□ -1.23
COL1A1P02452 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 CYCSP1-201ENST00000604815 315 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AC141002.1-201ENST00000607025 279 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AL021368.3-201ENST00000607119 578 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 MIR6798-201ENST00000612887 67 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.39□□□□□ -1.23
COL1A1P02452 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.39□□□□□ -1.23
COL1A1P02452 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
COL1A1P02452 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.39□□□□□ -1.23
COL1A1P02452 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL1A1P02452 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 AC008937.3-201ENST00000606813 1700 ntBASIC7.39□□□□□ -1.23
COL1A1P02452 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL1A1P02452 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL1A1P02452 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL1A1P02452 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 MYO5BP2-201ENST00000449815 1277 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 AC016027.4-201ENST00000450866 277 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 RN7SL629P-201ENST00000489622 285 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
COL1A1P02452 OR6M2P-201ENST00000529831 871 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 OR4A40P-201ENST00000533878 948 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 AC135626.1-201ENST00000556983 435 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 AC020916.2-201ENST00000591242 360 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 AC004477.3-201ENST00000614061 590 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL1A1P02452 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.38□□□□□ -1.23
COL1A1P02452 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.38□□□□□ -1.23
COL1A1P02452 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms