Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC095057.1-201ENST00000507583 168 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC008628.1-201ENST00000508663 265 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 NPIPB14P-203ENST00000532298 987 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC092375.1-201ENST00000550410 637 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 DNAJC19P3-201ENST00000594491 331 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.59□□□□□ -1.19
CTDP1Q9Y5B0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CTDP1Q9Y5B0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.59□□□□□ -1.2
CTDP1Q9Y5B0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 Z93929.1-201ENST00000418200 1475 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 RNU6-925P-201ENST00000384629 104 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 MIR541-201ENST00000401360 84 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 SNORA11.3-201ENST00000408471 128 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 ARMC4P1-201ENST00000438905 707 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 RPSAP40-201ENST00000442343 891 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC119751.4-201ENST00000507498 357 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC108103.1-201ENST00000511286 446 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC106785.4-201ENST00000569492 412 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC018754.1-201ENST00000607486 925 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 MIR6071-201ENST00000616741 78 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 MIR6778-201ENST00000617912 73 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC005899.7-201ENST00000618199 588 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 SNORA11.6-201ENST00000619030 128 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 TMCC1P1-201ENST00000518897 1980 ntBASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTDP1Q9Y5B0 CTAGE11P-201ENST00000451540 2353 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 TET1P1-201ENST00000426627 2301 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 MIPEPP2-201ENST00000422560 1819 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.57□□□□□ -1.2
CTDP1Q9Y5B0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms