Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 OR7E158P-201ENST00000524483 910 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AL445222.1-201ENST00000607259 628 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 AC021766.1-201ENST00000624404 741 ntBASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHANK3Q9BYB0 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 RNA5SP183-201ENST00000362452 119 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 RN7SKP59-201ENST00000410520 314 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC113412.1-201ENST00000425840 504 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AL662874.1-201ENST00000426065 230 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 RN7SL222P-201ENST00000476452 299 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC108693.1-201ENST00000496068 432 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 RNA5SP92-201ENST00000516437 110 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC020937.1-201ENST00000519677 1013 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 WBP1LP3-201ENST00000523033 208 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 SNORD91A-202ENST00000609620 191 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AC003992.1-201ENST00000635364 557 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 OR11H2-202ENST00000641517 1085 ntBASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHANK3Q9BYB0 AL355377.1-201ENST00000621125 1653 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC022905.1-201ENST00000503430 3048 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 RN7SKP279-201ENST00000411383 298 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 OR6E1P-201ENST00000414424 923 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AZGP1P2-201ENST00000454506 345 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC005532.2-201ENST00000467154 373 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 CBX1P5-201ENST00000475330 559 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 OR7E157P-201ENST00000494376 911 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 RN7SL466P-201ENST00000497546 295 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 SLC25A14P1-201ENST00000502867 901 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 GAPDHP71-201ENST00000511530 1003 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC074087.1-201ENST00000512059 724 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 CR383656.6-201ENST00000550518 394 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 TXNP4-201ENST00000575018 310 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC119403.2-201ENST00000590960 598 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 UGT2B27P-201ENST00000505092 1620 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC092821.3-202ENST00000641304 2767 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 SALL4P7-201ENST00000555779 3120 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC104447.1-201ENST00000624214 2124 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 GABARAPL3-201ENST00000412799 354 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 NME1P1-201ENST00000420914 382 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AL390119.1-201ENST00000440329 312 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AC023245.1-201ENST00000468501 517 ntBASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
SHANK3Q9BYB0 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms