Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNU6-348P-201ENST00000384386 107 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 Y_RNA.529-201ENST00000384586 119 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MCTS2P-201ENST00000394552 546 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 SUMO2P13-201ENST00000403109 272 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 RPL21P108-201ENST00000413857 481 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CEACAMP8-201ENST00000413902 580 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AL157698.1-201ENST00000415190 1011 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CHEK2P5-201ENST00000423877 246 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC233728.2-201ENST00000425348 757 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC016908.1-201ENST00000442571 1219 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MED28P7-201ENST00000456611 530 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 RPSAP48-201ENST00000466509 889 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC008429.4-201ENST00000521201 182 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC090515.3-201ENST00000560431 315 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC005377.1-201ENST00000605126 456 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC068276.1-201ENST00000605793 379 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AP001437.1-201ENST00000608783 456 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AL137000.1-201ENST00000610528 1244 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 MIR8075-201ENST00000614354 80 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 RN7SL126P-201ENST00000616400 299 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC073569.3-201ENST00000619055 682 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC002401.3-201ENST00000620020 440 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AP001052.1-201ENST00000626421 99 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AL356585.10-201ENST00000641883 123 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC106872.5-201ENST00000508856 1416 ntBASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 LCP2-210ENST00000628092 2421 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL25A1Q9BXS0 AL590004.4-201ENST00000566733 7060 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 PACRG-AS2-201ENST00000418665 1300 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC018880.1-201ENST00000418898 1319 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 FRG1BP-201ENST00000278882 761 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 FRG1CP-201ENST00000358464 769 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 RNU4-91P-201ENST00000364778 135 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 MITF-205ENST00000394348 1069 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 RNA5SP155-201ENST00000411154 129 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 TATDN1P1-201ENST00000414123 891 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms