Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.82□□□□□ -1.16
DDX11Q96FC9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DDX11Q96FC9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC007068.2-201ENST00000543168 395 ntBASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DDX11Q96FC9 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DDX11Q96FC9 RPL29P33-201ENST00000587474 316 ntBASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC011921.2-201ENST00000589465 152 ntBASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 OR7A11P-201ENST00000597719 953 ntBASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 AL953862.2-201ENST00000603089 820 ntBASIC7.82□□□□□ -1.16
DDX11Q96FC9 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.82□□□□□ -1.16
DDX11Q96FC9 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DDX11Q96FC9 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
DDX11Q96FC9 AL022323.4-201ENST00000623980 13120 ntBASIC7.82□□□□□ -1.16
DDX11Q96FC9 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
DDX11Q96FC9 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC233968.1-201ENST00000611212 1300 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 MIPEPP2-201ENST00000422560 1819 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 RNA5SP140-201ENST00000364524 92 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 RNA5SP474-201ENST00000391234 90 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC096537.2-201ENST00000413707 714 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 AL663061.1-201ENST00000416625 580 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 MTND4LP7-201ENST00000431728 294 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 RPS3AP6-201ENST00000484430 795 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 SNRPCP6-201ENST00000528310 210 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 MT1CP-201ENST00000567054 174 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC012368.3-201ENST00000604190 219 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC114878.2-201ENST00000604863 1251 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 CU459211.1-201ENST00000635667 749 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 MTCO1P25-201ENST00000414449 1799 ntBASIC7.81□□□□□ -1.16
DDX11Q96FC9 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
DDX11Q96FC9 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.81□□□□□ -1.16
DDX11Q96FC9 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
DDX11Q96FC9 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
DDX11Q96FC9 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
DDX11Q96FC9 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 OR52B5P-204ENST00000641744 3467 ntBASIC7.8□□□□□ -1.16
DDX11Q96FC9 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 AC005618.1-201ENST00000606901 3148 ntBASIC7.8□□□□□ -1.16
DDX11Q96FC9 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
DDX11Q96FC9 RNA5SP512-201ENST00000364550 120 ntBASIC7.8□□□□□ -1.16
DDX11Q96FC9 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.8□□□□□ -1.16
DDX11Q96FC9 SNORA11.3-201ENST00000408471 128 ntBASIC7.8□□□□□ -1.16
DDX11Q96FC9 RN7SKP188-201ENST00000410789 317 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms