Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 IGHV4-55-201ENST00000520889 368 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC084121.1-201ENST00000533882 835 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AL138960.1-201ENST00000613838 513 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 TCL6_3.1-201ENST00000619064 137 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AC073592.6-201ENST00000624271 415 ntBASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.54□□□□□ -1.36
RFWD3Q6PCD5 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 RN7SKP237-201ENST00000364663 301 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 RNA5SP431-201ENST00000410312 120 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 RPS7P14-201ENST00000426405 583 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 SOCS5P1-201ENST00000440415 949 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AL645936.1-201ENST00000441979 518 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 OR4D12P-201ENST00000509361 911 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 HSD3BP3-201ENST00000514706 994 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 BCAS2P1-201ENST00000528022 632 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AC073593.1-201ENST00000624500 411 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AC073488.6-201ENST00000632293 754 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 AL133243.2-201ENST00000610331 1621 ntBASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFWD3Q6PCD5 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.36
RFWD3Q6PCD5 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.52□□□□□ -1.36
RFWD3Q6PCD5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 AC027575.3-201ENST00000583058 2747 ntBASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 AL139805.1-201ENST00000407837 289 ntBASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 RN7SKP108-201ENST00000411367 328 ntBASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 AC116036.1-201ENST00000412199 367 ntBASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.52□□□□□ -1.37
RFWD3Q6PCD5 AC117394.1-201ENST00000477323 567 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms