Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 RN7SL177P-201ENST00000476596 299 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 IGKV1D-22-201ENST00000518953 324 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 IGHV1-14-201ENST00000523391 241 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AL121579.2-201ENST00000555466 590 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 TPRX1P1-201ENST00000557620 319 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AC011497.2-201ENST00000600255 639 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AC137695.1-201ENST00000604126 489 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AC024255.1-201ENST00000614376 102 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AL096712.1-201ENST00000614561 159 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.12□□□□□ -1.27
HERC4Q5GLZ8 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 RN7SKP81-201ENST00000365603 331 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 AMYP1-201ENST00000440059 1023 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 COX6B1P2-201ENST00000489624 230 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 AL133399.1-201ENST00000527476 298 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 NANOGNBP2-201ENST00000544753 553 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 AC027667.1-201ENST00000545814 304 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 AC051619.2-201ENST00000559063 397 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 AC073046.2-201ENST00000604756 527 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 TCL6_3.1-201ENST00000619064 137 ntBASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HERC4Q5GLZ8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 RNA5SP77-201ENST00000365394 120 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 MIR188-201ENST00000385034 86 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 U3.43-201ENST00000410734 213 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AL157884.1-201ENST00000424561 454 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 RPL12P12-201ENST00000424633 501 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 RPL5P7-201ENST00000444235 813 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 SNX18P26-201ENST00000458433 740 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AC106800.3-201ENST00000511389 308 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 RPL41P2-201ENST00000544920 409 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 AC067773.1-201ENST00000603284 1094 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.1□□□□□ -1.27
HERC4Q5GLZ8 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms