Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 GAPDHP58-201ENST00000438477 1006 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 PTMAP6-201ENST00000439110 327 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.57□□□□□ -1.04
PTCH1Q13635 AC073909.1-201ENST00000447112 999 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 AC016027.4-201ENST00000450866 277 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC8.57□□□□□ -1.04
PTCH1Q13635 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.57□□□□□ -1.04
PTCH1Q13635 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.57□□□□□ -1.04
PTCH1Q13635 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC8.57□□□□□ -1.04
PTCH1Q13635 IMMP1LP3-201ENST00000604197 224 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
PTCH1Q13635 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC8.57□□□□□ -1.04
PTCH1Q13635 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.57□□□□□ -1.04
PTCH1Q13635 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PTCH1Q13635 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.57□□□□□ -1.04
PTCH1Q13635 AL031651.1-201ENST00000615357 1438 ntBASIC8.57□□□□□ -1.04
PTCH1Q13635 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.57□□□□□ -1.04
PTCH1Q13635 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.56□□□□□ -1.04
PTCH1Q13635 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
PTCH1Q13635 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 AL121835.1-201ENST00000404250 354 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 RPL34P3-201ENST00000421454 338 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 YWHAEP1-201ENST00000453697 763 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 WBP1LP3-201ENST00000523033 208 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.56□□□□□ -1.04
PTCH1Q13635 AC092865.1-201ENST00000544395 1023 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8.56□□□□□ -1.04
PTCH1Q13635 AC044860.2-201ENST00000561005 179 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 AL132640.3-201ENST00000630473 177 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 NEPNP-201ENST00000404786 1371 ntBASIC8.56□□□□□ -1.04
PTCH1Q13635 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
PTCH1Q13635 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.56□□□□□ -1.04
PTCH1Q13635 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
PTCH1Q13635 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC8.56□□□□□ -1.04
PTCH1Q13635 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PTCH1Q13635 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
PTCH1Q13635 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PTCH1Q13635 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.55□□□□□ -1.04
PTCH1Q13635 RNU1-19P-201ENST00000363306 165 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.55□□□□□ -1.04
PTCH1Q13635 EIF3LP3-201ENST00000495197 822 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 RN7SL466P-201ENST00000497546 295 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 CYCSP22-201ENST00000517555 339 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.55□□□□□ -1.04
PTCH1Q13635 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC8.55□□□□□ -1.04
PTCH1Q13635 AP000662.1-201ENST00000530952 487 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC8.55□□□□□ -1.04
PTCH1Q13635 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PTCH1Q13635 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
PTCH1Q13635 AL137067.2-201ENST00000621202 131 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.55□□□□□ -1.04
PTCH1Q13635 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.55□□□□□ -1.04
PTCH1Q13635 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.55□□□□□ -1.04
PTCH1Q13635 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.55□□□□□ -1.04
PTCH1Q13635 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTCH1Q13635 GUCY1B2-204ENST00000531898 1979 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
PTCH1Q13635 AC119674.1-202ENST00000641333 1860 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTCH1Q13635 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTCH1Q13635 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.55□□□□□ -1.04
PTCH1Q13635 MROH3P-201ENST00000435735 2676 ntBASIC8.55□□□□□ -1.04
PTCH1Q13635 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PTCH1Q13635 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
PTCH1Q13635 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC016739.1-201ENST00000405359 345 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.54□□□□□ -1.04
PTCH1Q13635 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.54□□□□□ -1.04
PTCH1Q13635 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.54□□□□□ -1.04
PTCH1Q13635 AC023245.1-201ENST00000468501 517 ntBASIC8.54□□□□□ -1.04
PTCH1Q13635 AC093270.2-201ENST00000486157 792 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms