Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.33□□□□□ -1.24
ERVFC1P60507 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ERVFC1P60507 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERVFC1P60507 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERVFC1P60507 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.33□□□□□ -1.24
ERVFC1P60507 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
ERVFC1P60507 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
ERVFC1P60507 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
ERVFC1P60507 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 RBBP4P4-201ENST00000398588 1289 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 BX664727.1-201ENST00000416024 466 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC079807.1-201ENST00000429993 481 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AL590128.1-201ENST00000433407 286 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 MTND1P4-201ENST00000435196 415 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 RPSAP40-201ENST00000442343 891 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AL355355.1-201ENST00000442900 793 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 CABYRP1-201ENST00000465493 1045 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 MTND4LP3-201ENST00000468320 276 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC091860.1-201ENST00000505723 432 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC146944.3-201ENST00000509969 371 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC010625.1-201ENST00000511296 403 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC093664.1-201ENST00000511779 289 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 MAST4-IT1-201ENST00000514241 658 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC037479.1-201ENST00000558361 625 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC011270.1-201ENST00000558606 583 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC025283.1-201ENST00000572039 734 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC012175.1-201ENST00000603755 531 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AL512427.1-201ENST00000618593 349 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC123767.1-202ENST00000620407 817 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC026124.2-201ENST00000621847 656 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 LINC00216-201ENST00000623548 1126 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 AC073592.6-201ENST00000624271 415 ntBASIC7.32□□□□□ -1.24
ERVFC1P60507 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
ERVFC1P60507 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.32□□□□□ -1.24
ERVFC1P60507 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
ERVFC1P60507 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ERVFC1P60507 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERVFC1P60507 TRIM51HP-202ENST00000530412 1823 ntBASIC7.31□□□□□ -1.24
ERVFC1P60507 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.31□□□□□ -1.24
ERVFC1P60507 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERVFC1P60507 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
ERVFC1P60507 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ERVFC1P60507 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.31□□□□□ -1.24
ERVFC1P60507 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
ERVFC1P60507 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.31□□□□□ -1.24
ERVFC1P60507 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERVFC1P60507 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ERVFC1P60507 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ERVFC1P60507 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ERVFC1P60507 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms