Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC003992.1-201ENST00000635364 557 ntBASIC6.49□□□□□ -1.37
HTTP42858 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.49□□□□□ -1.37
HTTP42858 USP9YP9-201ENST00000429406 715 ntBASIC6.49□□□□□ -1.37
HTTP42858 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 AC012616.1-201ENST00000600294 197 ntBASIC6.49□□□□□ -1.37
HTTP42858 AP002799.1-201ENST00000623552 423 ntBASIC6.49□□□□□ -1.37
HTTP42858 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HTTP42858 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.48□□□□□ -1.37
HTTP42858 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HTTP42858 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HTTP42858 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 DUTP5-201ENST00000406790 469 ntBASIC6.48□□□□□ -1.37
HTTP42858 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.48□□□□□ -1.37
HTTP42858 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.48□□□□□ -1.37
HTTP42858 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.48□□□□□ -1.37
HTTP42858 RNA5SP400-201ENST00000517155 111 ntBASIC6.48□□□□□ -1.37
HTTP42858 AC134698.5-201ENST00000519444 336 ntBASIC6.48□□□□□ -1.37
HTTP42858 MIR6758-201ENST00000620653 63 ntBASIC6.48□□□□□ -1.37
HTTP42858 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
HTTP42858 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.48□□□□□ -1.37
HTTP42858 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HTTP42858 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HTTP42858 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 SNORA51.8-201ENST00000384234 132 ntBASIC6.48□□□□□ -1.37
HTTP42858 RNU1-77P-201ENST00000390868 162 ntBASIC6.48□□□□□ -1.37
HTTP42858 AL139415.1-201ENST00000424862 352 ntBASIC6.48□□□□□ -1.37
HTTP42858 CYCSP6-201ENST00000434498 302 ntBASIC6.48□□□□□ -1.37
HTTP42858 AC015864.1-201ENST00000496512 544 ntBASIC6.48□□□□□ -1.37
HTTP42858 NPM1P27-201ENST00000502784 830 ntBASIC6.48□□□□□ -1.37
HTTP42858 AC139365.2-201ENST00000517972 253 ntBASIC6.48□□□□□ -1.37
HTTP42858 OR4A42P-201ENST00000531397 938 ntBASIC6.48□□□□□ -1.37
HTTP42858 AL132640.3-201ENST00000630473 177 ntBASIC6.48□□□□□ -1.37
HTTP42858 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC6.48□□□□□ -1.37
HTTP42858 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HTTP42858 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HTTP42858 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HTTP42858 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HTTP42858 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HTTP42858 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 AC012519.1-201ENST00000424588 610 ntBASIC6.47□□□□□ -1.37
HTTP42858 ATP5J2P6-201ENST00000565203 266 ntBASIC6.47□□□□□ -1.37
HTTP42858 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.47□□□□□ -1.37
HTTP42858 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 AC110048.2-201ENST00000617013 6721 ntBASIC6.47□□□□□ -1.37
HTTP42858 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HTTP42858 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 AC016583.1-201ENST00000624221 2431 ntBASIC6.47□□□□□ -1.37
HTTP42858 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.47□□□□□ -1.37
HTTP42858 AC068790.4-201ENST00000602474 263 ntBASIC6.47□□□□□ -1.37
HTTP42858 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 AL139099.4-201ENST00000614802 114 ntBASIC6.47□□□□□ -1.37
HTTP42858 AC013488.1-201ENST00000526618 1838 ntBASIC6.47□□□□□ -1.37
HTTP42858 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HTTP42858 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 AL356317.1-201ENST00000396110 1436 ntBASIC6.47□□□□□ -1.37
HTTP42858 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 AC132825.3-201ENST00000562182 4710 ntBASIC6.47□□□□□ -1.37
HTTP42858 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HTTP42858 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HTTP42858 RNU4-4P-201ENST00000364588 130 ntBASIC6.47□□□□□ -1.37
HTTP42858 RNA5SP211-201ENST00000365516 117 ntBASIC6.47□□□□□ -1.37
HTTP42858 AL133325.1-201ENST00000421090 382 ntBASIC6.47□□□□□ -1.37
HTTP42858 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.47□□□□□ -1.37
HTTP42858 RPL38P3-201ENST00000484463 213 ntBASIC6.47□□□□□ -1.37
HTTP42858 SSX8-201ENST00000506270 579 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms