Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC131935.1-201ENST00000524621 333 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL1P22362 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.31□□□□□ -1.56
CCL1P22362 TDGP1-201ENST00000543961 1229 ntBASIC5.31□□□□□ -1.56
CCL1P22362 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCL1P22362 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL1P22362 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL1P22362 AL589765.6-201ENST00000601909 549 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AP001267.4-201ENST00000602598 545 ntBASIC5.31□□□□□ -1.56
CCL1P22362 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.31□□□□□ -1.56
CCL1P22362 AL390877.1-201ENST00000605704 214 ntBASIC5.31□□□□□ -1.56
CCL1P22362 RN7SL261P-201ENST00000613441 282 ntBASIC5.31□□□□□ -1.56
CCL1P22362 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.31□□□□□ -1.56
CCL1P22362 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.31□□□□□ -1.56
CCL1P22362 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 AC078880.4-201ENST00000617627 1749 ntBASIC5.31□□□□□ -1.56
CCL1P22362 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
CCL1P22362 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CCL1P22362 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCL1P22362 AC022164.1-201ENST00000568767 2673 ntBASIC5.3□□□□□ -1.56
CCL1P22362 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 AP000641.1-201ENST00000531988 1639 ntBASIC5.3□□□□□ -1.56
CCL1P22362 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCL1P22362 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL1P22362 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 RNA5SP485-201ENST00000365053 119 ntBASIC5.3□□□□□ -1.56
CCL1P22362 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.3□□□□□ -1.56
CCL1P22362 AL022324.2-201ENST00000434827 780 ntBASIC5.3□□□□□ -1.56
CCL1P22362 AC073410.1-201ENST00000435125 589 ntBASIC5.3□□□□□ -1.56
CCL1P22362 AL512593.1-201ENST00000444758 779 ntBASIC5.3□□□□□ -1.56
CCL1P22362 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.3□□□□□ -1.56
CCL1P22362 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.3□□□□□ -1.56
CCL1P22362 RN7SL39P-201ENST00000462264 297 ntBASIC5.3□□□□□ -1.56
CCL1P22362 RN7SL393P-201ENST00000463588 296 ntBASIC5.3□□□□□ -1.56
CCL1P22362 AC022730.1-201ENST00000473114 568 ntBASIC5.3□□□□□ -1.56
CCL1P22362 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.3□□□□□ -1.56
CCL1P22362 RN7SL502P-201ENST00000481857 290 ntBASIC5.3□□□□□ -1.56
CCL1P22362 RPL23AP40-201ENST00000487630 390 ntBASIC5.3□□□□□ -1.56
CCL1P22362 AC015524.1-201ENST00000491585 472 ntBASIC5.3□□□□□ -1.56
CCL1P22362 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL1P22362 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL1P22362 AC139713.1-202ENST00000512366 460 ntBASIC5.3□□□□□ -1.56
CCL1P22362 RNA5SP434-201ENST00000516647 121 ntBASIC5.3□□□□□ -1.56
CCL1P22362 Y_RNA.710-201ENST00000516975 110 ntBASIC5.3□□□□□ -1.56
CCL1P22362 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.3□□□□□ -1.56
CCL1P22362 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL1P22362 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.3□□□□□ -1.56
CCL1P22362 MIR4732-201ENST00000581873 76 ntBASIC5.3□□□□□ -1.56
CCL1P22362 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL1P22362 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.3□□□□□ -1.56
CCL1P22362 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 AC211486.4-201ENST00000621495 113 ntBASIC5.3□□□□□ -1.56
CCL1P22362 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
CCL1P22362 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCL1P22362 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCL1P22362 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
CCL1P22362 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 AC079753.1-201ENST00000623243 3868 ntBASIC5.29□□□□□ -1.56
CCL1P22362 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.29□□□□□ -1.56
CCL1P22362 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.29□□□□□ -1.56
CCL1P22362 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 OR2W4P-201ENST00000406496 926 ntBASIC5.29□□□□□ -1.56
CCL1P22362 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms