Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH1P12830 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH1P12830 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH1P12830 AL353763.1-201ENST00000624467 1628 ntBASIC6.18□□□□□ -1.42
CDH1P12830 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 AL353743.3-201ENST00000442109 1468 ntBASIC6.18□□□□□ -1.42
CDH1P12830 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH1P12830 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH1P12830 U3.43-201ENST00000410734 213 ntBASIC6.18□□□□□ -1.42
CDH1P12830 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH1P12830 AL157884.1-201ENST00000424561 454 ntBASIC6.18□□□□□ -1.42
CDH1P12830 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH1P12830 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH1P12830 RPL12P49-201ENST00000441100 121 ntBASIC6.18□□□□□ -1.42
CDH1P12830 AL356121.1-201ENST00000442911 156 ntBASIC6.18□□□□□ -1.42
CDH1P12830 RBMY2HP-201ENST00000457961 720 ntBASIC6.18□□□□□ -1.42
CDH1P12830 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH1P12830 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH1P12830 AC138517.1-201ENST00000515724 568 ntBASIC6.18□□□□□ -1.42
CDH1P12830 RNA5SP418-201ENST00000515951 117 ntBASIC6.18□□□□□ -1.42
CDH1P12830 SNORA48.9-201ENST00000516419 162 ntBASIC6.18□□□□□ -1.42
CDH1P12830 RNU6-362P-201ENST00000516736 90 ntBASIC6.18□□□□□ -1.42
CDH1P12830 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH1P12830 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH1P12830 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH1P12830 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH1P12830 AL121579.2-201ENST00000555466 590 ntBASIC6.18□□□□□ -1.42
CDH1P12830 TPRX1P1-201ENST00000557620 319 ntBASIC6.18□□□□□ -1.42
CDH1P12830 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 MIR3157-201ENST00000578688 85 ntBASIC6.18□□□□□ -1.42
CDH1P12830 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH1P12830 AC005479.3-201ENST00000602790 431 ntBASIC6.18□□□□□ -1.42
CDH1P12830 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.18□□□□□ -1.42
CDH1P12830 AL162377.2-201ENST00000624532 337 ntBASIC6.18□□□□□ -1.42
CDH1P12830 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH1P12830 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH1P12830 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH1P12830 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH1P12830 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH1P12830 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CDH1P12830 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH1P12830 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 MTCO1P8-201ENST00000416914 1523 ntBASIC6.17□□□□□ -1.42
CDH1P12830 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH1P12830 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDH1P12830 RNU6-167P-201ENST00000384292 106 ntBASIC6.17□□□□□ -1.42
CDH1P12830 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 HMGA1P8-201ENST00000414130 321 ntBASIC6.17□□□□□ -1.42
CDH1P12830 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH1P12830 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH1P12830 GTF3AP6-201ENST00000432585 986 ntBASIC6.17□□□□□ -1.42
CDH1P12830 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH1P12830 AC064862.5-201ENST00000440618 334 ntBASIC6.17□□□□□ -1.42
CDH1P12830 GTF2IP14-201ENST00000441415 586 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AC245291.3-201ENST00000443400 292 ntBASIC6.17□□□□□ -1.42
CDH1P12830 COX4I1P2-201ENST00000447446 547 ntBASIC6.17□□□□□ -1.42
CDH1P12830 CEACAMP11-201ENST00000455211 583 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AC106800.3-201ENST00000511389 308 ntBASIC6.17□□□□□ -1.42
CDH1P12830 RNU6-551P-201ENST00000516661 103 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH1P12830 COX6B1P4-201ENST00000519826 484 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH1P12830 AC233702.7-202ENST00000582941 211 ntBASIC6.17□□□□□ -1.42
CDH1P12830 RN7SL475P-201ENST00000583379 298 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.17□□□□□ -1.42
CDH1P12830 AL589765.6-201ENST00000601909 549 ntBASIC6.17□□□□□ -1.42
CDH1P12830 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AP003072.5-201ENST00000623872 773 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AC063952.1-203ENST00000634410 658 ntBASIC6.17□□□□□ -1.42
CDH1P12830 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.17□□□□□ -1.42
CDH1P12830 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
CDH1P12830 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CDH1P12830 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH1P12830 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDH1P12830 MTND5P12-201ENST00000502851 1449 ntBASIC6.16□□□□□ -1.42
CDH1P12830 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CDH1P12830 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
CDH1P12830 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDH1P12830 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH1P12830 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.16□□□□□ -1.42
CDH1P12830 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms