Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RN7SKP237-201ENST00000364663 301 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 VN1R12P-201ENST00000403778 876 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 RN7SKP121-201ENST00000410842 305 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.41□□□□□ -1.38
SMAD6O43541 AC097721.1-201ENST00000427150 1253 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.41□□□□□ -1.38
SMAD6O43541 RPSAP65-201ENST00000429660 595 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.41□□□□□ -1.38
SMAD6O43541 RPSAP40-201ENST00000442343 891 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.41□□□□□ -1.38
SMAD6O43541 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 RPL12P30-201ENST00000488389 499 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.41□□□□□ -1.38
SMAD6O43541 KHDC1P1-201ENST00000511053 508 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.41□□□□□ -1.38
SMAD6O43541 AP004607.6-201ENST00000525033 1202 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC019227.1-201ENST00000526902 510 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.41□□□□□ -1.38
SMAD6O43541 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 AC073916.1-201ENST00000545095 130 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC023389.2-201ENST00000580031 955 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SMAD6O43541 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.41□□□□□ -1.38
SMAD6O43541 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AL683813.2-201ENST00000605245 502 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AL023583.1-201ENST00000607518 1143 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC024255.1-201ENST00000614376 102 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC012254.5-201ENST00000623573 478 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC073592.6-201ENST00000624271 415 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AL357140.4-201ENST00000636827 412 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC105749.1-201ENST00000631338 2008 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 AP003486.1-201ENST00000525716 3994 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SMAD6O43541 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SMAD6O43541 AC105235.1-201ENST00000623208 1816 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.41□□□□□ -1.38
SMAD6O43541 AL137058.3-201ENST00000624531 3099 ntBASIC6.41□□□□□ -1.38
SMAD6O43541 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.41□□□□□ -1.38
SMAD6O43541 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SMAD6O43541 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMAD6O43541 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.4□□□□□ -1.38
SMAD6O43541 AL021877.2-201ENST00000624442 10684 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMAD6O43541 AC016251.2-201ENST00000623393 3089 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 LCOR-201ENST00000286067 4542 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMAD6O43541 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SMAD6O43541 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SMAD6O43541 RNA5SP110-201ENST00000362638 115 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.4□□□□□ -1.38
SMAD6O43541 SNORA11.5-201ENST00000408163 128 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.4□□□□□ -1.38
SMAD6O43541 NME1P1-201ENST00000420914 382 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.4□□□□□ -1.38
SMAD6O43541 AL354707.3-201ENST00000427308 331 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 ELOCP6-201ENST00000429066 328 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SMAD6O43541 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.4□□□□□ -1.38
SMAD6O43541 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 AC010240.2-201ENST00000445363 1205 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AL590004.3-202ENST00000445883 451 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 ELOCP12-201ENST00000458706 328 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 RN7SL326P-201ENST00000477493 296 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 AP003168.1-201ENST00000530091 307 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SMAD6O43541 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.4□□□□□ -1.38
SMAD6O43541 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.4□□□□□ -1.38
SMAD6O43541 AL845552.1-201ENST00000556820 323 ntBASIC6.4□□□□□ -1.38
SMAD6O43541 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms