Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.02□□□□□ -1.45
SLC28A1O00337 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AL390879.1-201ENST00000439143 386 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC28A1O00337 GAPDHP37-201ENST00000442317 968 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 AC016908.1-201ENST00000442571 1219 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.02□□□□□ -1.45
SLC28A1O00337 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.02□□□□□ -1.45
SLC28A1O00337 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AC093816.1-201ENST00000515076 913 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.02□□□□□ -1.45
SLC28A1O00337 AC008429.4-201ENST00000521201 182 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 OR6M2P-201ENST00000529831 871 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 AC084851.2-201ENST00000530377 364 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 AP004607.5-201ENST00000532034 217 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SLC28A1O00337 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 RN7SL475P-201ENST00000583379 298 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC28A1O00337 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SLC28A1O00337 IMMTP1-201ENST00000435590 2219 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 AL359091.1-201ENST00000449048 1734 ntBASIC6.02□□□□□ -1.45
SLC28A1O00337 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 AL359976.1-201ENST00000418655 3528 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SLC28A1O00337 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SLC28A1O00337 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 RPS26P38-201ENST00000414476 348 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC006509.1-201ENST00000420788 634 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AC092646.1-201ENST00000427142 901 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 NPM1P23-201ENST00000440193 849 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC068491.1-201ENST00000449539 1241 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 NPM1P9-201ENST00000453156 844 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AC112187.1-201ENST00000455837 479 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 RN7SL83P-201ENST00000468131 297 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 RN7SL369P-201ENST00000477138 299 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.01□□□□□ -1.45
SLC28A1O00337 PPP1R11P1-201ENST00000486095 376 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AL035690.1-201ENST00000490892 383 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 RNA5SP418-201ENST00000515951 117 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.01□□□□□ -1.45
SLC28A1O00337 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SLC28A1O00337 OR9G2P-201ENST00000533326 880 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.01□□□□□ -1.45
SLC28A1O00337 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.01□□□□□ -1.45
SLC28A1O00337 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 DYNLL1P1-201ENST00000595442 269 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.01□□□□□ -1.45
SLC28A1O00337 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC005725.1-201ENST00000577346 2607 ntBASIC6.01□□□□□ -1.45
SLC28A1O00337 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.01□□□□□ -1.45
SLC28A1O00337 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.01□□□□□ -1.45
SLC28A1O00337 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SLC28A1O00337 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6□□□□□ -1.45
SLC28A1O00337 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SLC28A1O00337 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms