Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 RNU6-925P-201ENST00000384629 104 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AL035422.1-201ENST00000414193 397 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 OSTCP4-201ENST00000424397 449 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC092865.3-201ENST00000425390 1026 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 RPSAP65-201ENST00000429660 595 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 KCTD9P1-201ENST00000430462 1167 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC069154.1-201ENST00000432914 542 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 PMS2P9-201ENST00000441237 515 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 RPL5P7-201ENST00000444235 813 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC108103.1-201ENST00000511286 446 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC005000.1-201ENST00000536192 288 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC008055.1-201ENST00000547032 609 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 RN7SL261P-201ENST00000613441 282 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 MIR6085-201ENST00000618314 110 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AC074276.2-201ENST00000619891 348 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AP001885.1-201ENST00000621658 558 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 LINC02495-203ENST00000636704 242 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 AL357140.4-201ENST00000636827 412 ntBASIC7.39□□□□□ -1.23
VTA1Q9NP79 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.39□□□□□ -1.23
VTA1Q9NP79 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VTA1Q9NP79 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC027279.1-201ENST00000568885 4284 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 MIR620-201ENST00000385232 95 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AL139805.1-201ENST00000407837 289 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 TXNP2-201ENST00000443918 295 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 HMGN1P2-201ENST00000445197 310 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC117395.1-201ENST00000487390 403 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 HMGN1P17-201ENST00000513734 295 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 ZNF519P4-201ENST00000514008 125 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 RNU6-491P-201ENST00000516099 110 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 NPIPB14P-203ENST00000532298 987 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms