Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 AF235103.2-201ENST00000525753 346 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AL352979.3-201ENST00000553515 247 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 MIR378H-201ENST00000579966 83 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AC090415.1-201ENST00000581877 847 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AP001004.1-201ENST00000582468 324 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC136475.10-201ENST00000620253 385 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 RPL23AP61-201ENST00000623642 466 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 AP003400.3-201ENST00000624904 346 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 HENMT1-201ENST00000370031 1717 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.45□□□□□ -1.06
HLA-CQ95604 MTCO1P6-201ENST00000481192 1384 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 HLF-208ENST00000573945 2977 ntTSL 5 BASIC8.45□□□□□ -1.06
HLA-CQ95604 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC114786.1-201ENST00000512892 1415 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.45□□□□□ -1.06
HLA-CQ95604 RARSP1-201ENST00000542842 1418 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC008537.3-201ENST00000623128 1881 ntBASIC8.45□□□□□ -1.06
HLA-CQ95604 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
HLA-CQ95604 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HLA-CQ95604 AC012464.3-201ENST00000604017 2773 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
HLA-CQ95604 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 SPATA2P1-201ENST00000431223 2055 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.44□□□□□ -1.06
HLA-CQ95604 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 HMGB1P5-201ENST00000255320 642 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 Y_RNA.296-201ENST00000364930 108 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 EEF1GP6-201ENST00000402309 905 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AL356776.1-201ENST00000406574 447 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 RNU6-575P-201ENST00000411326 105 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AL354751.2-201ENST00000415471 210 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 USP9YP13-201ENST00000417797 480 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AL592114.2-201ENST00000440142 532 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 OR52I1-201ENST00000450052 1050 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 NBPF2P-201ENST00000453025 661 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 RPL15P21-201ENST00000495592 567 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AL162311.2-201ENST00000550416 709 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC105275.2-201ENST00000567907 711 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.44□□□□□ -1.06
HLA-CQ95604 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC068020.1-201ENST00000594215 661 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AC020914.6-201ENST00000594327 272 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC130352.1-201ENST00000602979 661 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AC007347.2-201ENST00000623044 180 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 AC093909.6-201ENST00000624757 775 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
HLA-CQ95604 ATE1-AS1-202ENST00000636460 506 ntBASIC8.44□□□□□ -1.06
HLA-CQ95604 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
HLA-CQ95604 AC134508.1-201ENST00000570082 2977 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms