Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIR3910-1-201ENST00000580936 111 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 AC007938.3-201ENST00000604965 623 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 CNTNAP3P1-201ENST00000616657 906 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 MAPK10-301ENST00000641313 2482 ntBASIC9.11□□□□□ -0.95
VARS2Q5ST30 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VARS2Q5ST30 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC9.11□□□□□ -0.95
VARS2Q5ST30 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 HERC2P3-206ENST00000429257 4088 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AP002765.1-201ENST00000528675 1507 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 NSRP1P1-201ENST00000444067 1693 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC114980.1-201ENST00000505668 3157 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 TET1P1-201ENST00000426627 2301 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 GDI2P1-201ENST00000429312 1336 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 RPE-216ENST00000454822 2130 ntTSL 2 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 THBS3-210ENST00000541576 3200 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC005722.2-201ENST00000577087 3370 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 RACK1-201ENST00000376817 965 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AL592114.1-201ENST00000403842 483 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 CCNYL3-201ENST00000407030 998 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 RNU6-985P-201ENST00000410182 104 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 RPS3AP3-201ENST00000411933 242 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 ARMC8P1-201ENST00000443069 1289 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 RPL4P2-201ENST00000447259 1282 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC073415.1-201ENST00000449240 153 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 RN7SL854P-201ENST00000459767 295 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 RN7SL856P-201ENST00000461754 298 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC010493.1-201ENST00000513479 292 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 SCARNA20.3-201ENST00000516913 131 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC048344.2-201ENST00000547280 147 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC104785.1-201ENST00000603220 588 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC090948.2-201ENST00000607363 564 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC104237.2-201ENST00000612456 443 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 MIR7150-201ENST00000614393 94 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC069209.1-201ENST00000619282 651 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC138627.2-201ENST00000624202 601 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AC068205.4-201ENST00000637880 804 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AL022323.2-201ENST00000623239 3000 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 AP002991.2-201ENST00000623807 2801 ntBASIC9.1□□□□□ -0.95
VARS2Q5ST30 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
VARS2Q5ST30 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VARS2Q5ST30 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms