Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 TRIM51HP-202ENST00000530412 1823 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 OR56A4-201ENST00000330728 1209 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 RN7SKP174-201ENST00000363803 330 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 RNA5SP302-201ENST00000364896 100 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 U3.14-201ENST00000365363 227 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 CNN3P1-201ENST00000401596 935 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 RNU6-648P-201ENST00000410190 107 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 RN7SKP30-201ENST00000411373 334 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 TAF13P2-201ENST00000416876 286 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.58□□□□□ -1.36
GFRA1P56159 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 TNPO1P1-201ENST00000423641 1138 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 RPL5P6-201ENST00000425640 886 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC073900.1-201ENST00000429766 776 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 RPL5P4-201ENST00000434805 886 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 COX7BP2-201ENST00000437976 242 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC092393.1-201ENST00000439625 742 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AL161626.1-201ENST00000441480 490 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC015983.1-201ENST00000441577 373 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 MTND5P2-201ENST00000442927 1142 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 DBIL5P2-201ENST00000443827 253 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC016772.1-201ENST00000444170 1261 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.58□□□□□ -1.36
GFRA1P56159 AC236972.4-201ENST00000458091 963 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC040975.1-201ENST00000472104 316 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.58□□□□□ -1.36
GFRA1P56159 RN7SL775P-201ENST00000498361 336 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 OR5H4P-201ENST00000510851 923 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 IGKV1D-32-201ENST00000517449 318 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.58□□□□□ -1.36
GFRA1P56159 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.58□□□□□ -1.36
GFRA1P56159 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 AP005597.2-201ENST00000526238 341 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 NDUFA3P2-201ENST00000531434 232 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 AC023161.2-201ENST00000551218 780 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC024909.2-201ENST00000553035 286 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 DPPA3P2-202ENST00000557188 1219 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.58□□□□□ -1.36
GFRA1P56159 AC087465.1-201ENST00000560574 245 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 ULK4P2-202ENST00000564187 492 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC022069.1-201ENST00000582910 658 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.58□□□□□ -1.36
GFRA1P56159 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
GFRA1P56159 OR2AS2P-201ENST00000606902 342 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 AC135507.1-201ENST00000607214 561 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 FRG1HP-204ENST00000617940 757 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
GFRA1P56159 LINC01808-202ENST00000641680 1116 ntBASIC6.58□□□□□ -1.36
GFRA1P56159 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.58□□□□□ -1.36
GFRA1P56159 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
GFRA1P56159 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
GFRA1P56159 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
GFRA1P56159 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.57□□□□□ -1.36
GFRA1P56159 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
GFRA1P56159 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
GFRA1P56159 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
GFRA1P56159 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
GFRA1P56159 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.57□□□□□ -1.36
GFRA1P56159 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms