Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 WBP1LP11-201ENST00000586141 328 ntBASIC6.49□□□□□ -1.37
CDH6P55285 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH6P55285 HTR1DP1-201ENST00000616500 888 ntBASIC6.49□□□□□ -1.37
CDH6P55285 AC003992.1-201ENST00000635364 557 ntBASIC6.49□□□□□ -1.37
CDH6P55285 CASC19-246ENST00000641625 1606 ntBASIC6.49□□□□□ -1.37
CDH6P55285 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
CDH6P55285 TMCC1P1-201ENST00000518897 1980 ntBASIC6.49□□□□□ -1.37
CDH6P55285 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH6P55285 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH6P55285 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDH6P55285 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDH6P55285 RPL11P4-201ENST00000332269 436 ntBASIC6.48□□□□□ -1.37
CDH6P55285 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.48□□□□□ -1.37
CDH6P55285 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 RN7SKP146-201ENST00000410242 334 ntBASIC6.48□□□□□ -1.37
CDH6P55285 RN7SKP121-201ENST00000410842 305 ntBASIC6.48□□□□□ -1.37
CDH6P55285 RPS14P4-201ENST00000415880 418 ntBASIC6.48□□□□□ -1.37
CDH6P55285 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH6P55285 SOCS5P1-201ENST00000440415 949 ntBASIC6.48□□□□□ -1.37
CDH6P55285 CXCR2P1-202ENST00000443392 1074 ntBASIC6.48□□□□□ -1.37
CDH6P55285 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH6P55285 KF459542.1-201ENST00000450908 553 ntBASIC6.48□□□□□ -1.37
CDH6P55285 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH6P55285 OR4D12P-201ENST00000509361 911 ntBASIC6.48□□□□□ -1.37
CDH6P55285 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH6P55285 SNORA74.1-201ENST00000516320 180 ntBASIC6.48□□□□□ -1.37
CDH6P55285 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH6P55285 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH6P55285 AC092865.1-201ENST00000544395 1023 ntBASIC6.48□□□□□ -1.37
CDH6P55285 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH6P55285 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH6P55285 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH6P55285 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 AC093524.1-201ENST00000564266 1094 ntBASIC6.48□□□□□ -1.37
CDH6P55285 ARGFXP2-201ENST00000579304 949 ntBASIC6.48□□□□□ -1.37
CDH6P55285 AC012368.3-201ENST00000604190 219 ntBASIC6.48□□□□□ -1.37
CDH6P55285 AC011891.2-201ENST00000604949 397 ntBASIC6.48□□□□□ -1.37
CDH6P55285 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.48□□□□□ -1.37
CDH6P55285 MIR6811-201ENST00000620409 58 ntBASIC6.48□□□□□ -1.37
CDH6P55285 AL122023.1-201ENST00000622847 530 ntBASIC6.48□□□□□ -1.37
CDH6P55285 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.48□□□□□ -1.37
CDH6P55285 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH6P55285 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH6P55285 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH6P55285 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 ZNF969P-201ENST00000510345 2341 ntBASIC6.48□□□□□ -1.37
CDH6P55285 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDH6P55285 CCNT2P1-201ENST00000423082 1315 ntBASIC6.48□□□□□ -1.37
CDH6P55285 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.48□□□□□ -1.37
CDH6P55285 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH6P55285 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 AC093829.1-201ENST00000506662 1618 ntBASIC6.47□□□□□ -1.37
CDH6P55285 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH6P55285 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CDH6P55285 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CDH6P55285 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 SNORA43.1-201ENST00000364863 140 ntBASIC6.47□□□□□ -1.37
CDH6P55285 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDH6P55285 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDH6P55285 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDH6P55285 AL157702.1-201ENST00000398764 426 ntBASIC6.47□□□□□ -1.37
CDH6P55285 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 MTND2P12-201ENST00000417560 1252 ntBASIC6.47□□□□□ -1.37
CDH6P55285 ARMC4P1-201ENST00000438905 707 ntBASIC6.47□□□□□ -1.37
CDH6P55285 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH6P55285 POU5F1P5-201ENST00000445059 658 ntBASIC6.47□□□□□ -1.37
CDH6P55285 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH6P55285 AC073594.1-201ENST00000462065 364 ntBASIC6.47□□□□□ -1.37
CDH6P55285 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH6P55285 AC117500.1-201ENST00000497352 755 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms