Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.48□□□□□ -1.37
BRCA2P51587 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.48□□□□□ -1.37
BRCA2P51587 RPS4XP5-201ENST00000419038 768 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 SDC4P-201ENST00000453285 601 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 RPL32P33-201ENST00000487023 394 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.48□□□□□ -1.37
BRCA2P51587 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.48□□□□□ -1.37
BRCA2P51587 AC011840.5-201ENST00000582125 771 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 AL118522.2-201ENST00000616045 615 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
BRCA2P51587 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCA2P51587 FO082842.1-201ENST00000423552 1370 ntBASIC6.48□□□□□ -1.37
BRCA2P51587 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCA2P51587 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCA2P51587 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 RN7SKP113-201ENST00000363891 295 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.47□□□□□ -1.37
BRCA2P51587 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.47□□□□□ -1.37
BRCA2P51587 RPL7P45-201ENST00000455851 743 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.47□□□□□ -1.37
BRCA2P51587 AC073916.1-201ENST00000545095 130 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
BRCA2P51587 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
BRCA2P51587 RNA5SP30-201ENST00000365552 115 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.47□□□□□ -1.37
BRCA2P51587 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.47□□□□□ -1.37
BRCA2P51587 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.47□□□□□ -1.37
BRCA2P51587 OR6M2P-201ENST00000529831 871 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
BRCA2P51587 AP002799.1-201ENST00000623552 423 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
BRCA2P51587 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
BRCA2P51587 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.47□□□□□ -1.37
BRCA2P51587 AC004129.2-201ENST00000457229 287 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.47□□□□□ -1.37
BRCA2P51587 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCA2P51587 AC013701.1-201ENST00000522657 465 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 RNU4ATAC-201ENST00000580972 127 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.47□□□□□ -1.37
BRCA2P51587 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
BRCA2P51587 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCA2P51587 AC079753.1-201ENST00000623243 3868 ntBASIC6.46□□□□□ -1.37
BRCA2P51587 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BRCA2P51587 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
BRCA2P51587 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
BRCA2P51587 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BRCA2P51587 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BRCA2P51587 CYP4F29P-201ENST00000420685 446 ntBASIC6.46□□□□□ -1.37
BRCA2P51587 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.46□□□□□ -1.37
BRCA2P51587 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.46□□□□□ -1.37
BRCA2P51587 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.46□□□□□ -1.37
BRCA2P51587 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BRCA2P51587 AC063977.5-201ENST00000601044 974 ntBASIC6.46□□□□□ -1.37
BRCA2P51587 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
BRCA2P51587 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BRCA2P51587 KYNUP3-201ENST00000574386 1341 ntBASIC6.46□□□□□ -1.37
BRCA2P51587 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
BRCA2P51587 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
BRCA2P51587 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
BRCA2P51587 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC6.46□□□□□ -1.38
BRCA2P51587 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BRCA2P51587 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
BRCA2P51587 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.46□□□□□ -1.38
BRCA2P51587 COX6CP17-201ENST00000421389 185 ntBASIC6.46□□□□□ -1.38
BRCA2P51587 RPS27AP6-201ENST00000427962 448 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms