Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 SNORA70H-201ENST00000383910 135 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 SNORA70J-201ENST00000384182 135 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 RN7SKP161-201ENST00000411110 305 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 RPL21P50-201ENST00000417698 477 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC002127.1-201ENST00000421305 225 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 GTF2IP14-201ENST00000441415 586 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC009237.1-201ENST00000442127 744 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 OR13K1P-201ENST00000444577 975 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC234771.2-201ENST00000445718 597 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 COX4I1P2-201ENST00000447446 547 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 RN7SL643P-201ENST00000471845 291 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 RN7SL165P-201ENST00000477476 291 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC093816.1-201ENST00000515076 913 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC138517.1-201ENST00000515724 568 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 RNA5SP400-201ENST00000517155 111 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 CYCSP25-201ENST00000525280 316 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 GTF2IP11-201ENST00000526931 420 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 MIR3157-201ENST00000578688 85 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC026898.1-201ENST00000586404 571 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AL589863.1-201ENST00000595383 631 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AL445649.1-201ENST00000615941 691 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC018659.2-201ENST00000624690 715 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AL136984.1-201ENST00000607611 1893 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 AC011815.2-201ENST00000618230 2021 ntBASIC5.62□□□□□ -1.51
CSNK1A1P48729 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CSNK1A1P48729 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSNK1A1P48729 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CSNK1A1P48729 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSNK1A1P48729 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSNK1A1P48729 RN7SKP184-201ENST00000362348 333 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSNK1A1P48729 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSNK1A1P48729 SNORA70.9-201ENST00000384370 135 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 YWHAZP4-201ENST00000392459 708 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 AC003045.1-201ENST00000398779 713 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 PRELID1P1-201ENST00000403549 660 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CSNK1A1P48729 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 BMP6P1-201ENST00000431230 679 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 CEACAMP11-201ENST00000455211 583 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 RN7SL369P-201ENST00000477138 299 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 GM2AP2-201ENST00000491764 562 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 SNRPCP11-201ENST00000492453 205 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 IGHV4-55-201ENST00000520889 368 ntBASIC5.61□□□□□ -1.51
CSNK1A1P48729 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.61□□□□□ -1.51
CSNK1A1P48729 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms