Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.52□□□□□ -1.37
HTTP42858 AC068831.8-201ENST00000620171 435 ntBASIC6.52□□□□□ -1.37
HTTP42858 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
HTTP42858 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HTTP42858 OR10R3P-201ENST00000361688 942 ntBASIC6.51□□□□□ -1.37
HTTP42858 RN7SKP113-201ENST00000363891 295 ntBASIC6.51□□□□□ -1.37
HTTP42858 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.51□□□□□ -1.37
HTTP42858 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.51□□□□□ -1.37
HTTP42858 AL663074.2-201ENST00000440621 479 ntBASIC6.51□□□□□ -1.37
HTTP42858 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.51□□□□□ -1.37
HTTP42858 BNIP3P1-201ENST00000547295 580 ntBASIC6.51□□□□□ -1.37
HTTP42858 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.51□□□□□ -1.37
HTTP42858 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.51□□□□□ -1.37
HTTP42858 AC063977.5-201ENST00000601044 974 ntBASIC6.51□□□□□ -1.37
HTTP42858 IMMTP1-201ENST00000435590 2219 ntBASIC6.51□□□□□ -1.37
HTTP42858 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 RNA5SP319-201ENST00000362768 119 ntBASIC6.51□□□□□ -1.37
HTTP42858 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.51□□□□□ -1.37
HTTP42858 AC090114.3-201ENST00000479267 829 ntBASIC6.51□□□□□ -1.37
HTTP42858 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.51□□□□□ -1.37
HTTP42858 AC013701.1-201ENST00000522657 465 ntBASIC6.51□□□□□ -1.37
HTTP42858 OR56A7P-201ENST00000524865 941 ntBASIC6.51□□□□□ -1.37
HTTP42858 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.51□□□□□ -1.37
HTTP42858 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HTTP42858 TNPO1P2-201ENST00000426249 2665 ntBASIC6.5□□□□□ -1.37
HTTP42858 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HTTP42858 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 AC013442.1-201ENST00000397347 228 ntBASIC6.5□□□□□ -1.37
HTTP42858 AL357752.1-201ENST00000412817 349 ntBASIC6.5□□□□□ -1.37
HTTP42858 AL590139.1-201ENST00000416267 400 ntBASIC6.5□□□□□ -1.37
HTTP42858 RBM22P1-201ENST00000578589 1214 ntBASIC6.5□□□□□ -1.37
HTTP42858 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HTTP42858 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HTTP42858 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.5□□□□□ -1.37
HTTP42858 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HTTP42858 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 RNU1-32P-201ENST00000363937 159 ntBASIC6.5□□□□□ -1.37
HTTP42858 RN7SKP28-201ENST00000364770 305 ntBASIC6.5□□□□□ -1.37
HTTP42858 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.5□□□□□ -1.37
HTTP42858 MRPS21P7-201ENST00000566937 238 ntBASIC6.5□□□□□ -1.37
HTTP42858 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
HTTP42858 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC6.5□□□□□ -1.37
HTTP42858 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HTTP42858 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HTTP42858 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.5□□□□□ -1.37
HTTP42858 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.5□□□□□ -1.37
HTTP42858 HMGB3P24-201ENST00000433260 622 ntBASIC6.5□□□□□ -1.37
HTTP42858 AC109462.1-201ENST00000491087 368 ntBASIC6.5□□□□□ -1.37
HTTP42858 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.5□□□□□ -1.37
HTTP42858 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.5□□□□□ -1.37
HTTP42858 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.5□□□□□ -1.37
HTTP42858 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HTTP42858 AC000068.2-201ENST00000608816 460 ntBASIC6.5□□□□□ -1.37
HTTP42858 AC132068.1-201ENST00000623805 459 ntBASIC6.5□□□□□ -1.37
HTTP42858 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.5□□□□□ -1.37
HTTP42858 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 AC096921.2-201ENST00000561507 1916 ntBASIC6.49□□□□□ -1.37
HTTP42858 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC6.49□□□□□ -1.37
HTTP42858 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.49□□□□□ -1.37
HTTP42858 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HTTP42858 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HTTP42858 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.49□□□□□ -1.37
HTTP42858 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.49□□□□□ -1.37
HTTP42858 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.49□□□□□ -1.37
HTTP42858 AC020937.1-201ENST00000519677 1013 ntBASIC6.49□□□□□ -1.37
HTTP42858 RBM22P12-201ENST00000567098 1255 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms