Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 AC115223.1-201ENST00000466377 870 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.3□□□□□ -1.56
COL8A2P25067 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.3□□□□□ -1.56
COL8A2P25067 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 NDUFA5P11-201ENST00000567995 343 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AP005136.2-201ENST00000583253 1049 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 AC137695.1-201ENST00000604126 489 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
COL8A2P25067 MIR6861-201ENST00000618657 64 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AL162377.2-201ENST00000624532 337 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
COL8A2P25067 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
COL8A2P25067 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 AL391261.1-201ENST00000555712 1479 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 LYARP1-201ENST00000436977 1501 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.29□□□□□ -1.56
COL8A2P25067 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.29□□□□□ -1.56
COL8A2P25067 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COL8A2P25067 AC092646.2-201ENST00000431242 2095 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 COX6B1P3-201ENST00000312310 260 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL8A2P25067 RNA5SP350-201ENST00000363298 111 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 RNA5SP346-201ENST00000363541 121 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 RNA5SP478-201ENST00000364657 115 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 AC004386.1-201ENST00000393214 761 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.29□□□□□ -1.56
COL8A2P25067 RN7SKP240-201ENST00000410583 375 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 RN7SKP121-201ENST00000410842 305 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 RN7SKP144-201ENST00000411108 279 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.29□□□□□ -1.56
COL8A2P25067 KCTD9P1-201ENST00000430462 1167 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 IGLV3-4-201ENST00000432300 244 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.29□□□□□ -1.56
COL8A2P25067 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 MORF4-201ENST00000447135 971 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 HIGD1AP16-201ENST00000450986 258 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.29□□□□□ -1.56
COL8A2P25067 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.29□□□□□ -1.56
COL8A2P25067 RBBP4P1-201ENST00000502424 1276 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.29□□□□□ -1.56
COL8A2P25067 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 AL121579.2-201ENST00000555466 590 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 MIR4701-201ENST00000583094 63 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AC067852.5-201ENST00000589299 310 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.29□□□□□ -1.56
COL8A2P25067 AP001437.1-201ENST00000608783 456 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.29□□□□□ -1.56
COL8A2P25067 AC073389.3-201ENST00000609434 935 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 AC022106.1-201ENST00000612834 766 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AC010998.3-201ENST00000613871 631 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AC024255.1-201ENST00000614376 102 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL8A2P25067 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 AC105235.1-201ENST00000623208 1816 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 AP002370.1-201ENST00000528055 1602 ntBASIC5.29□□□□□ -1.56
COL8A2P25067 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.29□□□□□ -1.56
COL8A2P25067 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.29□□□□□ -1.56
COL8A2P25067 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL8A2P25067 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL8A2P25067 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms