Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RN7SKP38-201ENST00000410782 309 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 RN7SKP161-201ENST00000411110 305 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AL360013.1-201ENST00000419031 858 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 CYP4F30P-202ENST00000420048 405 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC009237.1-201ENST00000442127 744 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC245291.3-201ENST00000443400 292 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 RBMY2HP-201ENST00000457961 720 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 EIF4E2P2-201ENST00000492033 736 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC092349.1-201ENST00000504903 310 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 RNA5SP418-201ENST00000515951 117 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 IGHV4-55-201ENST00000520889 368 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 TDGP1-201ENST00000543961 1229 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC010547.7-201ENST00000570323 333 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 WBP1LP11-201ENST00000586141 328 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC024589.2-201ENST00000605642 1294 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 AL136984.1-201ENST00000607611 1893 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LINC01616-201ENST00000561816 2280 ntBASIC6.42□□□□□ -1.38
HLA-DPA1P20036 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DPA1P20036 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC022034.1-201ENST00000512867 2156 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 DNM1P47-203ENST00000571780 12667 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AP003170.5-201ENST00000397185 335 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC002127.1-201ENST00000421305 225 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 GTF3AP6-201ENST00000432585 986 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC096632.2-201ENST00000438139 1239 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 EMC3-AS1-205ENST00000438698 534 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 OR13K1P-201ENST00000444577 975 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 RN7SL643P-201ENST00000471845 291 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 RN7SL714P-201ENST00000487050 298 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 RPL17P2-201ENST00000491913 451 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 FTH1P8-201ENST00000498161 514 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC010343.2-201ENST00000510162 224 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC093816.1-201ENST00000515076 913 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC135983.3-201ENST00000528049 1226 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AP001885.1-201ENST00000621658 558 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC011815.2-201ENST00000618230 2021 ntBASIC6.41□□□□□ -1.38
HLA-DPA1P20036 AC027279.4-201ENST00000624371 2072 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms