Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.11□□□□□ -1.59
CCL3L1P16619 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.11□□□□□ -1.59
CCL3L1P16619 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL3L1P16619 CASC19-243ENST00000641588 1546 ntBASIC5.11□□□□□ -1.59
CCL3L1P16619 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.11□□□□□ -1.59
CCL3L1P16619 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCL3L1P16619 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL3L1P16619 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.11□□□□□ -1.59
CCL3L1P16619 AC110373.1-201ENST00000505994 3505 ntBASIC5.11□□□□□ -1.59
CCL3L1P16619 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
CCL3L1P16619 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCL3L1P16619 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCL3L1P16619 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCL3L1P16619 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCL3L1P16619 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCL3L1P16619 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCL3L1P16619 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCL3L1P16619 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCL3L1P16619 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCL3L1P16619 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.1□□□□□ -1.59
CCL3L1P16619 RBBP4P5-201ENST00000398583 1266 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 MIR1275-201ENST00000408770 80 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 RN7SKP108-201ENST00000411367 328 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AC116036.1-201ENST00000412199 367 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.1□□□□□ -1.59
CCL3L1P16619 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 SHQ1P1-201ENST00000437111 1544 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 AL590004.3-202ENST00000445883 451 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.1□□□□□ -1.59
CCL3L1P16619 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL3L1P16619 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.1□□□□□ -1.59
CCL3L1P16619 FTH1P8-201ENST00000498161 514 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AC108103.1-201ENST00000511286 446 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 MAST4-IT1-201ENST00000514241 658 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 TMCC1P1-201ENST00000518897 1980 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.1□□□□□ -1.59
CCL3L1P16619 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL3L1P16619 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL3L1P16619 AC096921.2-201ENST00000561507 1916 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.1□□□□□ -1.59
CCL3L1P16619 MRPS21P8-201ENST00000569196 235 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 RNU4ATAC-201ENST00000580972 127 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.1□□□□□ -1.59
CCL3L1P16619 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.1□□□□□ -1.59
CCL3L1P16619 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 AP001823.1-201ENST00000604056 1003 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 RFPL4AP6-201ENST00000616792 846 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCL3L1P16619 AL109924.4-201ENST00000623089 670 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AC003992.1-201ENST00000635364 557 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 AL357140.4-201ENST00000636827 412 ntBASIC5.1□□□□□ -1.59
CCL3L1P16619 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
CCL3L1P16619 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCL3L1P16619 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
CCL3L1P16619 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.1□□□□□ -1.59
CCL3L1P16619 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC002090.1-201ENST00000625000 2138 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC024651.2-201ENST00000562480 2098 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCL3L1P16619 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.09□□□□□ -1.59
CCL3L1P16619 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC009831.5-201ENST00000624000 3189 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCL3L1P16619 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.09□□□□□ -1.59
CCL3L1P16619 RPS17P17-201ENST00000419392 409 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 IGLV3-4-201ENST00000432300 244 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 OR3D1P-201ENST00000438288 955 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC010240.2-201ENST00000445363 1205 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC112187.1-201ENST00000455837 479 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AL022319.1-201ENST00000458183 1167 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 RN7SL254P-201ENST00000460609 284 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC021006.1-201ENST00000489849 553 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCL3L1P16619 AC018797.1-201ENST00000510791 255 ntBASIC5.09□□□□□ -1.59
CCL3L1P16619 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms