Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PPBPP2-201ENST00000513150 1362 ntBASIC6.97□□□□□ -1.29
TPM3P06753 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM3P06753 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 MRPS6P2-201ENST00000381143 370 ntBASIC6.97□□□□□ -1.29
TPM3P06753 NPM1P37-201ENST00000403105 874 ntBASIC6.97□□□□□ -1.29
TPM3P06753 RPL12P10-201ENST00000413498 498 ntBASIC6.97□□□□□ -1.29
TPM3P06753 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM3P06753 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM3P06753 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.97□□□□□ -1.29
TPM3P06753 RPS3AP38-201ENST00000435889 763 ntBASIC6.97□□□□□ -1.29
TPM3P06753 AC092106.2-201ENST00000436597 487 ntBASIC6.97□□□□□ -1.29
TPM3P06753 PHBP4-201ENST00000437447 837 ntBASIC6.97□□□□□ -1.29
TPM3P06753 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM3P06753 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM3P06753 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM3P06753 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TPM3P06753 AC106760.2-201ENST00000504159 619 ntBASIC6.97□□□□□ -1.29
TPM3P06753 AC010343.2-201ENST00000510162 224 ntBASIC6.97□□□□□ -1.29
TPM3P06753 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM3P06753 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 AC011193.2-201ENST00000582638 367 ntBASIC6.97□□□□□ -1.29
TPM3P06753 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.97□□□□□ -1.29
TPM3P06753 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.97□□□□□ -1.29
TPM3P06753 AC024451.4-201ENST00000602578 752 ntBASIC6.97□□□□□ -1.29
TPM3P06753 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.97□□□□□ -1.29
TPM3P06753 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM3P06753 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
TPM3P06753 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.97□□□□□ -1.29
TPM3P06753 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
TPM3P06753 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
TPM3P06753 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TPM3P06753 AL359955.1-201ENST00000455242 3275 ntBASIC6.96□□□□□ -1.29
TPM3P06753 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
TPM3P06753 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
TPM3P06753 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TPM3P06753 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM3P06753 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
TPM3P06753 AL157884.1-201ENST00000424561 454 ntBASIC6.96□□□□□ -1.3
TPM3P06753 AHCYP8-201ENST00000425108 209 ntBASIC6.96□□□□□ -1.3
TPM3P06753 VTI1BP4-201ENST00000427516 527 ntBASIC6.96□□□□□ -1.3
TPM3P06753 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM3P06753 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.96□□□□□ -1.3
TPM3P06753 snoU109.5-201ENST00000516231 132 ntBASIC6.96□□□□□ -1.3
TPM3P06753 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
TPM3P06753 GTF2IP11-201ENST00000526931 420 ntBASIC6.96□□□□□ -1.3
TPM3P06753 HNRNPCP8-201ENST00000528764 888 ntBASIC6.96□□□□□ -1.3
TPM3P06753 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 OR6M2P-201ENST00000529831 871 ntBASIC6.96□□□□□ -1.3
TPM3P06753 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 NPIPB1P-202ENST00000588786 828 ntBASIC6.96□□□□□ -1.3
TPM3P06753 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.96□□□□□ -1.3
TPM3P06753 SNORD96A-201ENST00000606577 79 ntBASIC6.96□□□□□ -1.3
TPM3P06753 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM3P06753 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM3P06753 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.96□□□□□ -1.3
TPM3P06753 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM3P06753 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM3P06753 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM3P06753 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
TPM3P06753 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TPM3P06753 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM3P06753 HDAC1P2-201ENST00000453661 1398 ntBASIC6.95□□□□□ -1.3
TPM3P06753 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM3P06753 UGT2B24P-201ENST00000514441 1597 ntBASIC6.95□□□□□ -1.3
TPM3P06753 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TPM3P06753 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM3P06753 AC126474.2-201ENST00000623268 1750 ntBASIC6.95□□□□□ -1.3
TPM3P06753 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
TPM3P06753 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM3P06753 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TPM3P06753 AC226101.1-201ENST00000401483 387 ntBASIC6.95□□□□□ -1.3
TPM3P06753 AL590635.1-201ENST00000406314 586 ntBASIC6.95□□□□□ -1.3
TPM3P06753 SNORA11D-201ENST00000408548 128 ntBASIC6.95□□□□□ -1.3
TPM3P06753 SNORA11E-201ENST00000408778 128 ntBASIC6.95□□□□□ -1.3
TPM3P06753 RNU2-5P-201ENST00000410533 180 ntBASIC6.95□□□□□ -1.3
TPM3P06753 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.95□□□□□ -1.3
TPM3P06753 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.95□□□□□ -1.3
TPM3P06753 AL158827.1-201ENST00000416300 391 ntBASIC6.95□□□□□ -1.3
TPM3P06753 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
TPM3P06753 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.95□□□□□ -1.3
TPM3P06753 REREP1Y-201ENST00000422655 198 ntBASIC6.95□□□□□ -1.3
TPM3P06753 AL354707.3-201ENST00000427308 331 ntBASIC6.95□□□□□ -1.3
TPM3P06753 AC013403.1-201ENST00000436954 263 ntBASIC6.95□□□□□ -1.3
TPM3P06753 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.95□□□□□ -1.3
TPM3P06753 REREP2Y-201ENST00000439103 200 ntBASIC6.95□□□□□ -1.3
TPM3P06753 AL139135.2-201ENST00000445040 433 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms