Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
COL5A2P05997 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
COL5A2P05997 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.03□□□□□ -1.12
COL5A2P05997 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
COL5A2P05997 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 RN7SKP128-201ENST00000364270 303 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 RNU105B-201ENST00000364478 208 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 RN7SKP124-201ENST00000364730 341 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.03□□□□□ -1.12
COL5A2P05997 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.03□□□□□ -1.12
COL5A2P05997 AL049840.6-201ENST00000604583 345 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 AC118658.2-201ENST00000618697 459 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.03□□□□□ -1.12
COL5A2P05997 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.03□□□□□ -1.12
COL5A2P05997 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
COL5A2P05997 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.03□□□□□ -1.12
COL5A2P05997 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.03□□□□□ -1.12
COL5A2P05997 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.03□□□□□ -1.12
COL5A2P05997 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
COL5A2P05997 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
COL5A2P05997 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
COL5A2P05997 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.12
COL5A2P05997 C4BPAP1-201ENST00000415474 1893 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
COL5A2P05997 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.02□□□□□ -1.13
COL5A2P05997 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC8.02□□□□□ -1.13
COL5A2P05997 RNU4-34P-201ENST00000410431 124 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.02□□□□□ -1.13
COL5A2P05997 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8.02□□□□□ -1.13
COL5A2P05997 AL662874.1-201ENST00000426065 230 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 AC126120.1-201ENST00000431082 470 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 MGAT2P1-201ENST00000449718 797 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 RN7SL72P-201ENST00000460697 269 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 RN7SL826P-201ENST00000479724 288 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 SNORA26.10-201ENST00000516427 141 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 AP000662.1-201ENST00000530952 487 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.02□□□□□ -1.13
COL5A2P05997 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 FAM27E4-201ENST00000605259 342 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.02□□□□□ -1.13
COL5A2P05997 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.02□□□□□ -1.13
COL5A2P05997 AC241584.2-201ENST00000637142 2090 ntBASIC8.02□□□□□ -1.13
COL5A2P05997 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.02□□□□□ -1.13
COL5A2P05997 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
COL5A2P05997 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.02□□□□□ -1.13
COL5A2P05997 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.02□□□□□ -1.13
COL5A2P05997 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
COL5A2P05997 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.02□□□□□ -1.13
COL5A2P05997 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
COL5A2P05997 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
COL5A2P05997 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.02□□□□□ -1.13
COL5A2P05997 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL5A2P05997 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL5A2P05997 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL5A2P05997 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.01□□□□□ -1.13
COL5A2P05997 AC105235.1-201ENST00000623208 1816 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
COL5A2P05997 RNU11-6P-201ENST00000391127 133 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 OR2AT2P-201ENST00000413438 905 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 NMD3P2-201ENST00000421815 761 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.01□□□□□ -1.13
COL5A2P05997 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.01□□□□□ -1.13
COL5A2P05997 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.01□□□□□ -1.13
COL5A2P05997 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.01□□□□□ -1.13
COL5A2P05997 RN7SL57P-201ENST00000493687 290 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 AC231760.1-201ENST00000498002 260 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.01□□□□□ -1.13
COL5A2P05997 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.01□□□□□ -1.13
COL5A2P05997 MIR1269B-201ENST00000580405 75 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 RNU4ATAC-201ENST00000580972 127 ntBASIC8.01□□□□□ -1.13
COL5A2P05997 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.01□□□□□ -1.13
COL5A2P05997 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms