Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RNA5SP110-201ENST00000362638 115 ntBASIC7.52□□□□□ -1.21
MBD4O95243 RNA5SP350-201ENST00000363298 111 ntBASIC7.52□□□□□ -1.21
MBD4O95243 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.52□□□□□ -1.21
MBD4O95243 SNORA11.5-201ENST00000408163 128 ntBASIC7.52□□□□□ -1.21
MBD4O95243 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.52□□□□□ -1.21
MBD4O95243 UBE2V1P14-201ENST00000415815 558 ntBASIC7.52□□□□□ -1.21
MBD4O95243 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.52□□□□□ -1.21
MBD4O95243 AC007679.3-201ENST00000434035 414 ntBASIC7.52□□□□□ -1.21
MBD4O95243 OR7E99P-201ENST00000505750 922 ntBASIC7.52□□□□□ -1.21
MBD4O95243 AC073581.1-201ENST00000519036 575 ntBASIC7.52□□□□□ -1.21
MBD4O95243 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.52□□□□□ -1.21
MBD4O95243 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.52□□□□□ -1.21
MBD4O95243 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.52□□□□□ -1.21
MBD4O95243 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.52□□□□□ -1.21
MBD4O95243 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.52□□□□□ -1.21
MBD4O95243 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 AP005901.4-201ENST00000577336 569 ntBASIC7.52□□□□□ -1.21
MBD4O95243 AC134669.1-201ENST00000581275 672 ntBASIC7.52□□□□□ -1.21
MBD4O95243 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.52□□□□□ -1.21
MBD4O95243 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.52□□□□□ -1.21
MBD4O95243 AL499605.1-201ENST00000604628 403 ntBASIC7.52□□□□□ -1.21
MBD4O95243 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
MBD4O95243 AP000641.1-201ENST00000531988 1639 ntBASIC7.52□□□□□ -1.21
MBD4O95243 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
MBD4O95243 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
MBD4O95243 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.52□□□□□ -1.21
MBD4O95243 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.52□□□□□ -1.21
MBD4O95243 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MBD4O95243 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
MBD4O95243 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
MBD4O95243 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.51□□□□□ -1.21
MBD4O95243 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.51□□□□□ -1.21
MBD4O95243 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.51□□□□□ -1.21
MBD4O95243 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MBD4O95243 RNA5SP333-201ENST00000363466 118 ntBASIC7.51□□□□□ -1.21
MBD4O95243 RNA5SP334-201ENST00000364825 118 ntBASIC7.51□□□□□ -1.21
MBD4O95243 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.51□□□□□ -1.21
MBD4O95243 RNA5SP115-201ENST00000411160 107 ntBASIC7.51□□□□□ -1.21
MBD4O95243 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.51□□□□□ -1.21
MBD4O95243 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
MBD4O95243 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.51□□□□□ -1.21
MBD4O95243 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.51□□□□□ -1.21
MBD4O95243 RPL5P7-201ENST00000444235 813 ntBASIC7.51□□□□□ -1.21
MBD4O95243 VPS25P1-201ENST00000455691 508 ntBASIC7.51□□□□□ -1.21
MBD4O95243 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.51□□□□□ -1.21
MBD4O95243 AP002884.1-201ENST00000479691 655 ntBASIC7.51□□□□□ -1.21
MBD4O95243 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC7.51□□□□□ -1.21
MBD4O95243 MTND6P8-201ENST00000503471 522 ntBASIC7.51□□□□□ -1.21
MBD4O95243 AC010343.2-201ENST00000510162 224 ntBASIC7.51□□□□□ -1.21
MBD4O95243 AC005363.1-201ENST00000530779 351 ntBASIC7.51□□□□□ -1.21
MBD4O95243 AP001858.2-201ENST00000536213 601 ntBASIC7.51□□□□□ -1.21
MBD4O95243 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.51□□□□□ -1.21
MBD4O95243 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 AL445649.1-201ENST00000615941 691 ntBASIC7.51□□□□□ -1.21
MBD4O95243 MIR6071-201ENST00000616741 78 ntBASIC7.51□□□□□ -1.21
MBD4O95243 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.51□□□□□ -1.21
MBD4O95243 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
MBD4O95243 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.51□□□□□ -1.21
MBD4O95243 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 AC006600.2-201ENST00000624834 2506 ntBASIC7.51□□□□□ -1.21
MBD4O95243 IFIT1P1-201ENST00000400497 1449 ntBASIC7.51□□□□□ -1.21
MBD4O95243 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
MBD4O95243 AC010168.2-201ENST00000562691 5428 ntBASIC7.51□□□□□ -1.21
MBD4O95243 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MBD4O95243 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.51□□□□□ -1.21
MBD4O95243 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MBD4O95243 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MBD4O95243 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.5□□□□□ -1.21
MBD4O95243 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MBD4O95243 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MBD4O95243 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.5□□□□□ -1.21
MBD4O95243 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
MBD4O95243 PABPC1P8-201ENST00000452851 2086 ntBASIC7.5□□□□□ -1.21
MBD4O95243 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.5□□□□□ -1.21
MBD4O95243 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
MBD4O95243 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.5□□□□□ -1.21
MBD4O95243 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
MBD4O95243 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MBD4O95243 AC027575.3-201ENST00000583058 2747 ntBASIC7.5□□□□□ -1.21
MBD4O95243 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
MBD4O95243 RNU1-49P-201ENST00000363468 159 ntBASIC7.5□□□□□ -1.21
MBD4O95243 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
MBD4O95243 MIR621-201ENST00000384919 96 ntBASIC7.5□□□□□ -1.21
MBD4O95243 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
MBD4O95243 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms