Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 RNA5SP418-201ENST00000515951 117 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AP001804.1-201ENST00000526868 919 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL049874.4-201ENST00000557593 255 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AC090651.1-201ENST00000567865 634 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SL657P-201ENST00000582431 293 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 MIR3159-201ENST00000584572 74 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AC090774.2-201ENST00000584708 322 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 RPL7AP69-201ENST00000595306 806 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AL391262.2-201ENST00000622466 494 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AC003992.1-201ENST00000635364 557 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AC132825.8-201ENST00000640783 297 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 AP003486.1-201ENST00000525716 3994 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 RNF19BPY-201ENST00000458209 1550 ntBASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TCRBV7S3A2A0A539 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 CCDC150P1-201ENST00000537123 2215 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 RNA5SP85-201ENST00000365378 119 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SKP129-201ENST00000410288 299 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AL354707.3-201ENST00000427308 331 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC079922.1-201ENST00000443291 359 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SL790P-201ENST00000474043 298 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AL079303.1-201ENST00000486611 463 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SL714P-201ENST00000487050 298 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC122714.1-201ENST00000502510 459 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 MINOS1P4-201ENST00000515470 318 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 RPL3P13-201ENST00000550415 216 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 CHEK2P2-201ENST00000554701 672 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 SYPL1P2-201ENST00000582878 727 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC027334.1-201ENST00000603257 310 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TCRBV7S3A2A0A539 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 AL133243.2-201ENST00000610331 1621 ntBASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TCRBV7S3A2A0A539 SNORA70.9-201ENST00000384370 135 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms