Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL133480.2-201ENST00000456723 487 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 RN7SL655P-201ENST00000486087 298 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 SCARNA11.1-201ENST00000516918 132 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 HNRNPCP1-201ENST00000556181 766 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 OR4C49P-201ENST00000563891 900 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 MIR132-201ENST00000591554 101 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AL049829.3-202ENST00000604278 711 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 MIR6849-201ENST00000618543 69 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AC005355.2-201ENST00000625064 484 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 FANCD2P2-201ENST00000437591 1400 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 AC092070.2-203ENST00000598377 3644 ntBASIC5.87□□□□□ -1.47
VAPAQ9P0L0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VAPAQ9P0L0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AL359955.1-201ENST00000455242 3275 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AL359091.1-201ENST00000449048 1734 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 SNORA7A-201ENST00000384765 139 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AL121977.1-201ENST00000401636 979 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 MRPL32P1-201ENST00000406301 247 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC021876.1-201ENST00000425959 359 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 RPS7P14-201ENST00000426405 583 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AL731534.1-201ENST00000434711 269 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 RN7SL643P-201ENST00000471845 291 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 RN7SL350P-201ENST00000492591 299 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC093664.1-201ENST00000511779 289 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC103855.4-201ENST00000533158 265 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 RPL7AP69-201ENST00000595306 806 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 DYNLL1P1-201ENST00000595442 269 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 OR5M2P-202ENST00000641241 4242 ntBASIC5.86□□□□□ -1.47
VAPAQ9P0L0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VAPAQ9P0L0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 AL080312.1-201ENST00000256654 824 ntBASIC5.85□□□□□ -1.47
VAPAQ9P0L0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 IGLV3-4-201ENST00000432300 244 ntBASIC5.85□□□□□ -1.47
VAPAQ9P0L0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.85□□□□□ -1.47
VAPAQ9P0L0 AC009244.1-201ENST00000450566 258 ntBASIC5.85□□□□□ -1.47
VAPAQ9P0L0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms