Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNRPCP11-201ENST00000492453 205 ntBASIC6.62□□□□□ -1.35
SIX2Q9NPC8 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 GUSBP9-201ENST00000510138 584 ntBASIC6.62□□□□□ -1.35
SIX2Q9NPC8 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 AC244502.2-201ENST00000543361 851 ntBASIC6.62□□□□□ -1.35
SIX2Q9NPC8 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 PRELID3BP3-201ENST00000584963 545 ntBASIC6.62□□□□□ -1.35
SIX2Q9NPC8 MIR132-201ENST00000591554 101 ntBASIC6.62□□□□□ -1.35
SIX2Q9NPC8 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 IMMTP1-201ENST00000435590 2219 ntBASIC6.62□□□□□ -1.35
SIX2Q9NPC8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
SIX2Q9NPC8 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 SNORA77.2-201ENST00000408571 112 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 BX679664.2-201ENST00000439282 283 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 H3F3AP5-201ENST00000475267 429 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AC095052.1-201ENST00000509955 863 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 ZNF519P4-201ENST00000514008 125 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 RPSAP75-201ENST00000605848 301 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AC015819.1-201ENST00000613588 663 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.61□□□□□ -1.35
SIX2Q9NPC8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SIX2Q9NPC8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC114876.1-201ENST00000490962 1366 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 RNA5SP375-201ENST00000362975 119 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 RPL23AP17-201ENST00000401064 499 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 FAM183DP-201ENST00000421987 399 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 VN1R20P-201ENST00000425215 966 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 HSPE1P27-201ENST00000430808 296 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC004890.1-201ENST00000461005 181 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 TPM3P3-201ENST00000521343 354 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 OR4A6P-201ENST00000534364 970 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 NDUFB9P1-201ENST00000604683 510 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AL080312.2-201ENST00000613001 630 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC012676.3-201ENST00000614983 479 ntBASIC6.6□□□□□ -1.35
SIX2Q9NPC8 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SIX2Q9NPC8 AC016583.1-201ENST00000624221 2431 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms