Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC025283.1-201ENST00000572039 734 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AF131215.7-201ENST00000602443 707 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC099785.1-201ENST00000605697 437 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC010857.1-201ENST00000606398 594 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC097381.3-201ENST00000608962 462 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 HTR1DP1-201ENST00000616500 888 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC026108.1-201ENST00000635444 547 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 AC092999.1-201ENST00000624004 1924 ntBASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHKBP1Q8TBC3 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 DDX18P5-201ENST00000534547 1306 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 YES1P1-201ENST00000418510 1628 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 ANKRD36P1-201ENST00000344424 659 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 Y_RNA.3-201ENST00000362331 103 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 PDCL3P5-201ENST00000398028 722 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL021407.1-201ENST00000404531 386 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 ZNF965P-201ENST00000432501 817 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 OR5M13P-201ENST00000433944 937 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 FABP5P3-201ENST00000437960 408 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 BX005266.3-201ENST00000443013 1075 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC005297.1-201ENST00000444765 862 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC044797.1-201ENST00000445744 679 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 PPIAP32-201ENST00000449940 472 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 SEPT7P3-201ENST00000455017 621 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 PTMAP1-205ENST00000455552 325 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC063955.1-201ENST00000462872 685 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 RN7SL849P-201ENST00000485236 295 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC112518.2-201ENST00000508565 425 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 HPRT1P1-201ENST00000509498 657 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC108157.1-201ENST00000510511 539 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC113191.1-201ENST00000517759 403 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC135626.1-201ENST00000556983 435 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 OR4N3P-201ENST00000559395 818 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL031846.1-201ENST00000560933 314 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 OR7A11P-201ENST00000597719 953 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 RN7SKP299-201ENST00000606679 301 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC116651.1-201ENST00000609724 556 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AL121809.2-201ENST00000613169 341 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 MIR6813-201ENST00000621638 56 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC135068.4-201ENST00000622949 925 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC012020.1-201ENST00000624541 1728 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 AC090983.1-201ENST00000623426 3897 ntBASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHKBP1Q8TBC3 TRIM53CP-201ENST00000531490 1354 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms