Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SOX5-203ENST00000396007 1379 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC7.71□□□□□ -1.18
DEPDC4Q8N2C3 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 OLFM5P-201ENST00000411807 1478 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC103591.2-201ENST00000265259 766 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RNU6-619P-201ENST00000365146 108 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RN7SKP204-201ENST00000365481 310 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RNA5SP88-201ENST00000365560 109 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 TMSB4XP8-201ENST00000402089 135 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 BMP2KL-201ENST00000414251 1225 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 TMSB4XP6-201ENST00000415187 135 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC245054.1-201ENST00000420944 258 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 TMSB4XP1-201ENST00000424567 135 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC002069.1-201ENST00000429649 1159 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 USP12PX-201ENST00000432383 1057 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 PIGCP2-201ENST00000433617 835 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RPL5P4-201ENST00000434805 886 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC092427.1-201ENST00000439177 601 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RPS29P3-201ENST00000439929 171 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC069213.3-201ENST00000454858 474 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 BZW1P1-201ENST00000454901 1240 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RN7SL223P-201ENST00000470401 294 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RPL19P13-201ENST00000483119 583 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 ALG1L12P-201ENST00000515046 434 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 RNA5SP287-201ENST00000516358 103 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC104117.2-201ENST00000523735 515 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC069240.2-201ENST00000550242 609 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC092718.4-201ENST00000566639 716 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC126175.1-201ENST00000617041 758 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AL157786.1-207ENST00000627771 695 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 ZNF840P-201ENST00000504759 1996 ntBASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
DEPDC4Q8N2C3 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 PARP4P1-201ENST00000435945 2337 ntBASIC7.69□□□□□ -1.18
DEPDC4Q8N2C3 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms