Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 SEPT14P19-203ENST00000633205 211 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AL390195.2-201ENST00000564771 2023 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 ABCA17P-204ENST00000494925 3478 ntBASIC8.3□□□□□ -1.08
RNF135Q8IUD6 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF135Q8IUD6 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC011477.1-204ENST00000623416 1325 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 RBPJP6-201ENST00000411556 1431 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 TAF9BP1-201ENST00000396646 746 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AL079341.1-201ENST00000404701 1207 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 MRPL32P1-201ENST00000406301 247 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 PAICSP7-201ENST00000419829 962 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 ATP5F1P1-201ENST00000433775 569 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 WBP1LP1-201ENST00000460451 896 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 TUBBP11-201ENST00000472255 252 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC100843.1-201ENST00000475372 550 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 NCOR1P1-202ENST00000486162 291 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC107398.1-201ENST00000486904 505 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 COX6CP11-201ENST00000555293 229 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 HMGN1P26-201ENST00000558737 303 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC012414.6-201ENST00000568241 401 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC068790.7-201ENST00000602347 528 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC009237.13-201ENST00000603193 276 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC091805.2-201ENST00000603848 235 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC007497.1-201ENST00000610421 561 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC026367.2-201ENST00000610630 553 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC007347.2-201ENST00000623044 180 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 FKBP1AP4-201ENST00000631775 336 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 OR8B9P-202ENST00000642028 5216 ntBASIC8.29□□□□□ -1.08
RNF135Q8IUD6 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF135Q8IUD6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms