Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SKA2-207ENST00000583380 583 ntTSL 5 BASIC8.18□□□□□ -1.1
COL16A1Q07092 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL16A1Q07092 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.18□□□□□ -1.1
COL16A1Q07092 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL16A1Q07092 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL16A1Q07092 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
COL16A1Q07092 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.17□□□□□ -1.1
COL16A1Q07092 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 Z99129.4-201ENST00000624649 2435 ntBASIC8.17□□□□□ -1.1
COL16A1Q07092 RPS15AP30-201ENST00000420976 390 ntBASIC8.17□□□□□ -1.1
COL16A1Q07092 RPS26P41-201ENST00000450370 284 ntBASIC8.17□□□□□ -1.1
COL16A1Q07092 AC009220.1-201ENST00000451614 275 ntBASIC8.17□□□□□ -1.1
COL16A1Q07092 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC8.17□□□□□ -1.1
COL16A1Q07092 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.17□□□□□ -1.1
COL16A1Q07092 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.17□□□□□ -1.1
COL16A1Q07092 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 AP004607.2-201ENST00000533949 322 ntBASIC8.17□□□□□ -1.1
COL16A1Q07092 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.17□□□□□ -1.1
COL16A1Q07092 AL049872.1-201ENST00000556323 322 ntBASIC8.17□□□□□ -1.1
COL16A1Q07092 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
COL16A1Q07092 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
COL16A1Q07092 AF230666.2-201ENST00000602328 725 ntBASIC8.17□□□□□ -1.1
COL16A1Q07092 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
COL16A1Q07092 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL16A1Q07092 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 FBXL21-201ENST00000297158 1305 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 AC112255.1-201ENST00000624070 2493 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
COL16A1Q07092 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.16□□□□□ -1.1
COL16A1Q07092 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC8.16□□□□□ -1.1
COL16A1Q07092 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC8.16□□□□□ -1.1
COL16A1Q07092 CUBNP2-201ENST00000443534 1139 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 AC103563.5-201ENST00000455643 364 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 GYG1P1-201ENST00000460864 698 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 AC079841.1-201ENST00000481228 950 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 AC021146.10-201ENST00000515628 706 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 HMGB1P42-201ENST00000532126 553 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 AC018552.1-201ENST00000562099 811 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 AC087763.1-201ENST00000603391 286 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.16□□□□□ -1.1
COL16A1Q07092 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.16□□□□□ -1.1
COL16A1Q07092 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
COL16A1Q07092 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
COL16A1Q07092 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.16□□□□□ -1.1
COL16A1Q07092 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
COL16A1Q07092 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL16A1Q07092 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.15□□□□□ -1.1
COL16A1Q07092 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.15□□□□□ -1.1
COL16A1Q07092 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
COL16A1Q07092 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.15□□□□□ -1.1
COL16A1Q07092 AL772161.1-201ENST00000439130 476 ntBASIC8.15□□□□□ -1.1
COL16A1Q07092 AC007686.1-201ENST00000488511 463 ntBASIC8.15□□□□□ -1.1
COL16A1Q07092 RN7SL346P-201ENST00000491561 294 ntBASIC8.15□□□□□ -1.1
COL16A1Q07092 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.15□□□□□ -1.1
COL16A1Q07092 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.15□□□□□ -1.1
COL16A1Q07092 MRPS16P1-201ENST00000523462 412 ntBASIC8.15□□□□□ -1.1
COL16A1Q07092 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.15□□□□□ -1.1
COL16A1Q07092 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL16A1Q07092 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms