Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 FXNP1-201ENST00000555153 337 ntBASIC6.92□□□□□ -1.3
UBE3AQ05086 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE3AQ05086 AC007448.1-201ENST00000582714 234 ntBASIC6.92□□□□□ -1.3
UBE3AQ05086 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 AC107993.1-201ENST00000591343 684 ntBASIC6.92□□□□□ -1.3
UBE3AQ05086 AC092266.1-201ENST00000610958 165 ntBASIC6.92□□□□□ -1.3
UBE3AQ05086 AL080312.2-201ENST00000613001 630 ntBASIC6.92□□□□□ -1.3
UBE3AQ05086 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
UBE3AQ05086 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE3AQ05086 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE3AQ05086 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.92□□□□□ -1.3
UBE3AQ05086 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE3AQ05086 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE3AQ05086 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE3AQ05086 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
UBE3AQ05086 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE3AQ05086 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE3AQ05086 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE3AQ05086 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE3AQ05086 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 MTCO1P28-201ENST00000574177 1528 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
UBE3AQ05086 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
UBE3AQ05086 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
UBE3AQ05086 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
UBE3AQ05086 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AC007114.2-201ENST00000576014 4281 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AL157702.1-201ENST00000398764 426 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE3AQ05086 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 MED28P4-201ENST00000433137 572 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE3AQ05086 SETP20-201ENST00000457046 852 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 RN7SL643P-201ENST00000471845 291 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 TRBV8-1-201ENST00000481590 279 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 DEFB109A-201ENST00000482450 265 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 AGGF1P3-201ENST00000493675 1213 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 SNX18P24-201ENST00000505249 671 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AC021146.10-201ENST00000515628 706 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 RNU6-362P-201ENST00000516736 90 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AC078878.1-201ENST00000539832 958 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE3AQ05086 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE3AQ05086 FAM27E2-201ENST00000619668 403 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AC129778.1-202ENST00000623812 261 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.91□□□□□ -1.3
UBE3AQ05086 AL591379.1-207ENST00000635982 261 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.91□□□□□ -1.3
UBE3AQ05086 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE3AQ05086 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
UBE3AQ05086 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.91□□□□□ -1.3
UBE3AQ05086 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.91□□□□□ -1.3
UBE3AQ05086 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UBE3AQ05086 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
UBE3AQ05086 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.9□□□□□ -1.3
UBE3AQ05086 AL353763.1-201ENST00000624467 1628 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 AC132219.2-201ENST00000624416 2327 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 NCOA4P3-201ENST00000513203 1877 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.9□□□□□ -1.3
UBE3AQ05086 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 RNU4-23P-201ENST00000362839 140 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE3AQ05086 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
UBE3AQ05086 SNORA11B-201ENST00000408175 129 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.9□□□□□ -1.3
UBE3AQ05086 RPL23AP85-201ENST00000421838 433 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 IPPKP1-201ENST00000422501 768 ntBASIC6.9□□□□□ -1.3
UBE3AQ05086 AC104843.2-201ENST00000427666 297 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms